RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TAX1BP1Q86VP1 789 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 ANGEL1Q9UNK9 670 aaKnown RBP19.82■□□□□ 0.76
PTPRU-202ENST00000373779 ABCA6Q8N139 1617 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 E7EWF7 191 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 PSMA7O14818 248 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 MATR3P43243 847 aaKnown RBP eCLIP19.82■□□□□ 0.76
PTPRU-202ENST00000373779 PPP2R3AQ06190 1150 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 TMEM87BQ96K49 555 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 PYCARDQ9ULZ3 195 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 METP08581 1390 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 GOLGA6L7A0A1B0GV03 622 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 GIGYF1O75420 1035 aaPredicted RBP19.81■□□□□ 0.76
PTPRU-202ENST00000373779 NUTM2BA6NNL0 878 aaPredicted RBP19.81■□□□□ 0.76
PTPRU-202ENST00000373779 NUTM2EB1AL46 878 aaPredicted RBP19.81■□□□□ 0.76
PTPRU-202ENST00000373779 B4E1Z4 1266 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 AKR1B10O60218 316 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 IQSEC3Q9UPP2 1182 aaPredicted RBP19.81■□□□□ 0.76
PTPRU-202ENST00000373779 RILPL1Q5EBL4 403 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 MPHOSPH10O00566 681 aaKnown RBP19.81■□□□□ 0.76
PTPRU-202ENST00000373779 CALM1P0DP23 149 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 CALM2P0DP24 149 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 CALM3P0DP25 149 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 MAP4K1Q92918 833 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 XAGE2Q96GT9 111 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 MRVI1Q9Y6F6 885 aa19.81■□□□□ 0.76
PTPRU-202ENST00000373779 CCDC96Q2M329 555 aa19.8■□□□□ 0.76
PTPRU-202ENST00000373779 CNGA4Q8IV77 575 aa19.8■□□□□ 0.76
PTPRU-202ENST00000373779 CUTAO60888 179 aa19.8■□□□□ 0.76
PTPRU-202ENST00000373779 ZNF594Q96JF6 807 aaPredicted RBP19.8■□□□□ 0.76
PTPRU-202ENST00000373779 GLI2P10070 1586 aa19.8■□□□□ 0.76
PTPRU-202ENST00000373779 GPAA1O43292 621 aa19.8■□□□□ 0.76
PTPRU-202ENST00000373779 MICALCLQ6ZW33 695 aa19.8■□□□□ 0.76
PTPRU-202ENST00000373779 IGSF1Q8N6C5 1336 aa19.8■□□□□ 0.76
PTPRU-202ENST00000373779 IRS4O14654 1257 aaPredicted RBP19.79■□□□□ 0.76
PTPRU-202ENST00000373779 ZPR1O75312 459 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 CABLES1Q8TDN4 633 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 QRICH2Q9H0J4 1663 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 PFKFB2O60825 505 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 KRT83P78385 493 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 SLC4A8Q2Y0W8 1093 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 ZSCAN29Q8IWY8 852 aaPredicted RBP19.79■□□□□ 0.76
PTPRU-202ENST00000373779 MAGEB6P1A0A0J9YX57 407 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 ADALQ6DHV7 355 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 ZFP91Q96JP5 570 aaPredicted RBP19.79■□□□□ 0.76
PTPRU-202ENST00000373779 USP28Q96RU2 1077 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 CABP5Q9NP86 173 aa19.79■□□□□ 0.76
PTPRU-202ENST00000373779 RNF17Q9BXT8 1623 aaKnown RBP19.79■□□□□ 0.76
PTPRU-202ENST00000373779 HLTFQ14527 1009 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTPRU-202ENST00000373779 HELBQ8NG08 1087 aaPredicted RBP19.78■□□□□ 0.76
PTPRU-202ENST00000373779 XPO4Q9C0E2 1151 aaKnown RBP19.78■□□□□ 0.76
PTPRU-202ENST00000373779 E9PCH4 1651 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 RBM5P52756 815 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTPRU-202ENST00000373779 UBXN1Q04323 297 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 CARD6Q9BX69 1037 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 UBA5Q9GZZ9 404 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 ABCC3O15438 1527 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 MBD4O95243 580 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 CAPN2P17655 700 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 MIGA1Q8NAN2 632 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 MRFAP1L1Q96HT8 127 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 VPS18Q9P253 973 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 HECW2Q9P2P5 1572 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 RHOXF2BP0C7M4 288 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 RHOXF2Q9BQY4 288 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 VAT1LQ9HCJ6 419 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 GUCA1BQ9UMX6 200 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 KRT86O43790 486 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 CLEC17AQ6ZS10 378 aa19.78■□□□□ 0.76
PTPRU-202ENST00000373779 ZNF274Q96GC6 653 aaPredicted RBP19.78■□□□□ 0.76
PTPRU-202ENST00000373779 SPTY2D1Q68D10 685 aaPredicted RBP19.77■□□□□ 0.76
PTPRU-202ENST00000373779 ZKSCAN3Q9BRR0 538 aa19.77■□□□□ 0.76
PTPRU-202ENST00000373779 IQUBQ8NA54 791 aa19.77■□□□□ 0.76
PTPRU-202ENST00000373779 LRRC27Q9C0I9 530 aa19.77■□□□□ 0.76
PTPRU-202ENST00000373779 HSF2BPO75031 334 aa19.77■□□□□ 0.76
PTPRU-202ENST00000373779 BAG3O95817 575 aa19.77■□□□□ 0.76
PTPRU-202ENST00000373779 LRRC8AQ8IWT6 810 aa19.77■□□□□ 0.76
PTPRU-202ENST00000373779 KIAA1468Q9P260 1216 aa19.77■□□□□ 0.76
PTPRU-202ENST00000373779 PCDH11XQ9BZA7 1347 aa19.77■□□□□ 0.75
PTPRU-202ENST00000373779 PCDH11YQ9BZA8 1340 aa19.77■□□□□ 0.75
PTPRU-202ENST00000373779 IFFO1Q0D2I5 559 aa19.77■□□□□ 0.75
PTPRU-202ENST00000373779 IGSF22Q8N9C0 903 aa19.77■□□□□ 0.75
PTPRU-202ENST00000373779 ARHGAP6O43182 974 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 DEXIO95424 95 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 TUBBP07437 444 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 IL2RBP14784 551 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 KRT40Q6A162 431 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 TDRD7Q8NHU6 1098 aaKnown RBP19.76■□□□□ 0.75
PTPRU-202ENST00000373779 SEC62Q99442 399 aaKnown RBP19.76■□□□□ 0.75
PTPRU-202ENST00000373779 CALML3P27482 149 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 ANKRD18AQ8IVF6 992 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 MLKLQ8NB16 471 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 FAM89AQ96GI7 184 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 KIF2CQ99661 725 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 CHD1O14646 1710 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 TACC1O75410 805 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 LDHCP07864 332 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 STX8Q9UNK0 236 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 GNAQP50148 359 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 RNF187Q5TA31 235 aaPredicted RBP19.76■□□□□ 0.75
PTPRU-202ENST00000373779 MYSM1Q5VVJ2 828 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms