RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 HTATSF1O43719 755 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 A1BGP04217 495 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 CDC27P30260 824 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 HNRNPH1P31943 449 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 VSNL1P62760 191 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 EYA1Q99502 592 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 DESI2Q9BSY9 194 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 IMPACTQ9P2X3 320 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 IRF6O14896 467 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 PPP2R2CQ9Y2T4 447 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 NALCNQ8IZF0 1738 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 CCDC73Q6ZRK6 1079 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 UBE3BQ7Z3V4 1068 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 CNNM3Q8NE01 707 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 MED15Q96RN5 788 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 ARFGAP3Q9NP61 516 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 RAB21Q9UL25 225 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 USP42Q9H9J4 1324 aaKnown RBP10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 BMP6P22004 513 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 LMOD1P29536 600 aaPredicted RBP10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 USP5P45974 858 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 SCRN1Q12765 414 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 MMS22LQ6ZRQ5 1243 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
SMARCA1-203ENST00000371123 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 ZSCAN31Q96LW9 406 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 NCOA5Q9HCD5 579 aaKnown RBP10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 TLR7Q9NYK1 1049 aaKnown RBP10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 PCDHA7Q9UN72 937 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 JCADQ9P266 1359 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 RPS6KB1P23443 525 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 TXLNAP40222 546 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 GSDMDP57764 484 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 RAPGEF4Q8WZA2 1011 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 SGSM3Q96HU1 749 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 FAXDC2Q96IV6 333 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 LRRC37A3O60309 1634 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 CLGNO14967 610 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 TBX2Q13207 712 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 NMIQ13287 307 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 TADA2BQ86TJ2 420 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 EGFL6Q8IUX8 553 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 GJB4Q9NTQ9 266 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 MROH7-TTC4A0A0A0MT08 1334 aa10.06□□□□□ -0.8
SMARCA1-203ENST00000371123 GOLIM4O00461 696 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 SFPQP23246 707 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 GPTP24298 496 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 PDE4BQ07343 736 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 RABEP2Q9H5N1 569 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 FANCCQ00597 558 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 KLHL10Q6JEL2 608 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 MNS1Q8NEH6 495 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 RABGGTAQ92696 567 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 PUF60Q9UHX1 559 aaKnown RBP10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 FMN2Q9NZ56 1722 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 AGPSO00116 658 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 KINO60870 393 aaKnown RBP10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 IBSPP21815 317 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 LIG3P49916 1009 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 STOX1Q6ZVD7 989 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 FOXP4Q8IVH2 680 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 TC2NQ8N9U0 490 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 NOA1Q8NC60 698 aaKnown RBP10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 XAGE2Q96GT9 111 aa10.05□□□□□ -0.8
SMARCA1-203ENST00000371123 CUTAO60888 179 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 FNTAP49354 379 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 KARSQ15046 597 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 MAP9Q49MG5 647 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 DNAAF4Q8WXU2 420 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 FAM204AQ9H8W3 233 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 ARGLU1Q9NWB6 273 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 CCDC151A5D8V7 595 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 STK38Q15208 465 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 TMED8Q6PL24 325 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 MSANTD4Q8NCY6 345 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 HNRNPLLQ8WVV9 542 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 CEP89Q96ST8 783 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 MAP3K19Q56UN5 1328 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 NRDCO43847 1150 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 MARCKSP29966 332 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 ADKP55263 362 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 FAM160A1Q05DH4 1040 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 CCDC150Q8NCX0 1101 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 SMARCC2Q8TAQ2 1214 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 PPM1EQ8WY54 764 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 AK7Q96M32 723 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 FANCLQ9NW38 375 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 KIAA1468Q9P260 1216 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 CLIC4Q9Y696 253 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 GRIN2DO15399 1336 aa10.04□□□□□ -0.8
SMARCA1-203ENST00000371123 TIMM10P62072 90 aa10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMARCA1-203ENST00000371123 FSIP1Q8NA03 581 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms