RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CTAGE15A4D2H0 777 aa22.27■■□□□ 1.16
LMO4-202ENST00000370544 A1BGP04217 495 aa22.27■■□□□ 1.16
LMO4-202ENST00000370544 CTAGE8P0CG41 777 aa22.27■■□□□ 1.16
LMO4-202ENST00000370544 CTAGE6Q86UF2 777 aa22.27■■□□□ 1.16
LMO4-202ENST00000370544 CTAGE4Q8IX94 777 aa22.27■■□□□ 1.16
LMO4-202ENST00000370544 IQUBQ8NA54 791 aa22.27■■□□□ 1.16
LMO4-202ENST00000370544 APPBP2Q92624 585 aa22.27■■□□□ 1.16
LMO4-202ENST00000370544 DRC1Q96MC2 740 aa22.27■■□□□ 1.16
LMO4-202ENST00000370544 SNX14Q9Y5W7 946 aa22.27■■□□□ 1.15
LMO4-202ENST00000370544 MRVI1Q9Y6F6 885 aa22.27■■□□□ 1.15
LMO4-202ENST00000370544 CCDC175P0C221 793 aa22.26■■□□□ 1.15
LMO4-202ENST00000370544 DYNC1I1O14576 645 aa22.26■■□□□ 1.15
LMO4-202ENST00000370544 BMS1Q14692 1282 aaKnown RBP22.26■■□□□ 1.15
LMO4-202ENST00000370544 FERMT1Q9BQL6 677 aa22.26■■□□□ 1.15
LMO4-202ENST00000370544 ACTN2P35609 894 aa22.26■■□□□ 1.15
LMO4-202ENST00000370544 UBXN1Q04323 297 aa22.26■■□□□ 1.15
LMO4-202ENST00000370544 TACC1O75410 805 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 PRDM10Q9NQV6 1147 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 WWC3Q9ULE0 1092 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 PNMA6EA0A0J9YXQ4 647 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 UBE4AQ14139 1066 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 MICALCLQ6ZW33 695 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 KRT83P78385 493 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 GCKRQ14397 625 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 FAM227BQ96M60 508 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 PLIN2Q99541 437 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 ELP1O95163 1332 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 B4DLN1 442 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 MRPL12P52815 198 aaKnown RBP22.25■■□□□ 1.15
LMO4-202ENST00000370544 TMEM87AQ8NBN3 555 aa22.25■■□□□ 1.15
LMO4-202ENST00000370544 NAP1L4Q99733 375 aaKnown RBP22.25■■□□□ 1.15
LMO4-202ENST00000370544 RNF216Q9NWF9 866 aaPredicted RBP22.25■■□□□ 1.15
LMO4-202ENST00000370544 CCDC87Q9NVE4 849 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 BLMP54132 1417 aaPredicted RBP22.24■■□□□ 1.15
LMO4-202ENST00000370544 FSD2A1L4K1 749 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 DEXIO95424 95 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 NF2P35240 595 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 GPAA1O43292 621 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 ZNF174Q15697 407 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 SELENOOQ9BVL4 669 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 VWA3AA6NCI4 1184 aa22.24■■□□□ 1.15
LMO4-202ENST00000370544 CCDC97Q96F63 343 aaPredicted RBP22.24■■□□□ 1.15
LMO4-202ENST00000370544 SGSM2O43147 1006 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 HSF2BPO75031 334 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 EIF4A1P60842 406 aaKnown RBP22.23■■□□□ 1.15
LMO4-202ENST00000370544 ARID5AQ03989 594 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 IMPG2Q9BZV3 1241 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 ZKSCAN5Q9Y2L8 839 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 HS2ST1Q7LGA3 356 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 TTC12Q9H892 705 aaPredicted RBP22.23■■□□□ 1.15
LMO4-202ENST00000370544 IFNKQ9P0W0 207 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 TMEM2Q9UHN6 1383 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 A0A1B0GVL5 298 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 PRPHP41219 470 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 RNF187Q5TA31 235 aaPredicted RBP22.23■■□□□ 1.15
LMO4-202ENST00000370544 TCHPQ9BT92 498 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 INCENPQ9NQS7 918 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 CLEC11AQ9Y240 323 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 RILPL1Q5EBL4 403 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 NEK11Q8NG66 645 aa22.23■■□□□ 1.15
LMO4-202ENST00000370544 FAM160A1Q05DH4 1040 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 NBPF14Q5TI25 921 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 LLPHQ9BRT6 129 aaKnown RBP22.22■■□□□ 1.15
LMO4-202ENST00000370544 KDM2BQ8NHM5 1336 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 GGA1Q9UJY5 639 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 PLEKHG3A1L390 1219 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 TUBB4AP04350 444 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 LETM2Q2VYF4 491 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 CEP112Q8N8E3 955 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 LPIN2Q92539 896 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 CCDC42Q96M95 316 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 KBTBD3Q8NAB2 608 aa22.22■■□□□ 1.15
LMO4-202ENST00000370544 ANGEL1Q9UNK9 670 aaKnown RBP22.22■■□□□ 1.15
LMO4-202ENST00000370544 CTAGE9A4FU28 777 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 BBXQ8WY36 941 aaPredicted RBP22.21■■□□□ 1.15
LMO4-202ENST00000370544 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 KRT86O43790 486 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 TAF5LO75529 589 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 KIF5AQ12840 1032 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 SH2D4AQ9H788 454 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 ZBTB21Q9ULJ3 1066 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 INSRP06213 1382 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 RGS22Q8NE09 1264 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 GPCPD1Q9NPB8 672 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 DNAJC10Q8IXB1 793 aa22.21■■□□□ 1.15
LMO4-202ENST00000370544 ADGBQ8N7X0 1667 aa22.2■■□□□ 1.15
LMO4-202ENST00000370544 LMBR1Q8WVP7 490 aa22.2■■□□□ 1.14
LMO4-202ENST00000370544 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.14
LMO4-202ENST00000370544 LMAN1P49257 510 aa22.2■■□□□ 1.14
LMO4-202ENST00000370544 CALRP27797 417 aaKnown RBP22.2■■□□□ 1.14
LMO4-202ENST00000370544 SV2BQ7L1I2 683 aa22.2■■□□□ 1.14
LMO4-202ENST00000370544 RASAL2Q9UJF2 1139 aa22.2■■□□□ 1.14
LMO4-202ENST00000370544 KDM5AP29375 1690 aaKnown RBP22.19■■□□□ 1.14
LMO4-202ENST00000370544 DDX12PQ92771 950 aa22.19■■□□□ 1.14
LMO4-202ENST00000370544 DDX17Q92841 729 aaKnown RBP22.19■■□□□ 1.14
LMO4-202ENST00000370544 SPDYE4A6NLX3 237 aa22.19■■□□□ 1.14
LMO4-202ENST00000370544 NCOA5Q9HCD5 579 aaKnown RBP22.19■■□□□ 1.14
LMO4-202ENST00000370544 MROH5Q6ZUA9 1318 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms