RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
PRDM1-203ENST00000369096 IFT74Q96LB3 600 aa17.72■□□□□ 0.43
PRDM1-203ENST00000369096 IRX3P78415 501 aaPredicted RBP17.72■□□□□ 0.43
PRDM1-203ENST00000369096 CCDC122Q5T0U0 273 aa17.72■□□□□ 0.43
PRDM1-203ENST00000369096 ZBTB21Q9ULJ3 1066 aa17.72■□□□□ 0.43
PRDM1-203ENST00000369096 CALML3P27482 149 aa17.72■□□□□ 0.43
PRDM1-203ENST00000369096 RFC4P35249 363 aa17.72■□□□□ 0.43
PRDM1-203ENST00000369096 NAA16Q6N069 864 aaPredicted RBP17.72■□□□□ 0.43
PRDM1-203ENST00000369096 FAM184BQ9ULE4 1060 aa17.72■□□□□ 0.43
PRDM1-203ENST00000369096 OGFOD1Q8N543 542 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 GPR161Q8N6U8 529 aaKnown RBP17.71■□□□□ 0.43
PRDM1-203ENST00000369096 MRRFQ96E11 262 aaKnown RBP17.71■□□□□ 0.43
PRDM1-203ENST00000369096 ERCC5P28715 1186 aaPredicted RBP17.71■□□□□ 0.43
PRDM1-203ENST00000369096 SLC9C2Q5TAH2 1124 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 FAM204AQ9H8W3 233 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 ATP10BO94823 1461 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 GAS8O95995 478 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 DCAF17Q5H9S7 520 aaPredicted RBP17.71■□□□□ 0.43
PRDM1-203ENST00000369096 CEP85LQ5SZL2 805 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 ANKRD13DQ6ZTN6 518 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 GBP7Q8N8V2 638 aaPredicted RBP17.71■□□□□ 0.43
PRDM1-203ENST00000369096 NUF2Q9BZD4 464 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 FAM114A2Q9NRY5 505 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 IFNL2Q8IZJ0 200 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 RASSF4Q9H2L5 321 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.43
PRDM1-203ENST00000369096 PIK3R4Q99570 1358 aa17.71■□□□□ 0.42
PRDM1-203ENST00000369096 PPP2R3AQ06190 1150 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 GTF3C6Q969F1 213 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 PLIN2Q99541 437 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 CPSF2Q9P2I0 782 aaKnown RBP17.7■□□□□ 0.42
PRDM1-203ENST00000369096 NUP160Q12769 1436 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 ERCC3P19447 782 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 HDXQ7Z353 690 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 KIFC2Q96AC6 838 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 ATP11AP98196 1134 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 SATB1Q01826 763 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 SP4Q02446 784 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 CCDC26Q8TAB7 109 aa17.7■□□□□ 0.42
PRDM1-203ENST00000369096 HGSO14964 777 aaPredicted RBP17.7■□□□□ 0.42
PRDM1-203ENST00000369096 B4DLN1 442 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 E7EVH7 732 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 SPOPO43791 374 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 MRPL12P52815 198 aaKnown RBP17.69■□□□□ 0.42
PRDM1-203ENST00000369096 BACH1O14867 736 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 U2AF2P26368 475 aaKnown RBP eCLIP17.69■□□□□ 0.42
PRDM1-203ENST00000369096 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
PRDM1-203ENST00000369096 CCDC65Q8IXS2 484 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 ZGPATQ8N5A5 531 aaKnown RBP17.69■□□□□ 0.42
PRDM1-203ENST00000369096 GTPBP4Q9BZE4 634 aaKnown RBP17.69■□□□□ 0.42
PRDM1-203ENST00000369096 NDUFAB1O14561 156 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 LMNTD2Q8IXW0 634 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 HDAC9Q9UKV0 1011 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 CCDC141Q6ZP82 1450 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 BIRC3Q13489 604 aa17.69■□□□□ 0.42
PRDM1-203ENST00000369096 ECM2O94769 699 aaPredicted RBP17.68■□□□□ 0.42
PRDM1-203ENST00000369096 GKAP1Q5VSY0 366 aaPredicted RBP17.68■□□□□ 0.42
PRDM1-203ENST00000369096 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRDM1-203ENST00000369096 SNRPA1P09661 255 aaKnown RBP17.68■□□□□ 0.42
PRDM1-203ENST00000369096 ATP5DP30049 168 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 FYB2Q5VWT5 728 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 CNGA4Q8IV77 575 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 CSRNP2Q9H175 543 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 AGTPBP1Q9UPW5 1226 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 ARID4AP29374 1257 aaPredicted RBP17.68■□□□□ 0.42
PRDM1-203ENST00000369096 RRP36Q96EU6 259 aaKnown RBP17.68■□□□□ 0.42
PRDM1-203ENST00000369096 PZPP20742 1482 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 RPL13P26373 211 aaKnown RBP17.68■□□□□ 0.42
PRDM1-203ENST00000369096 EVCP57679 992 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 ST5P78524 1137 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 TMCO4Q5TGY1 634 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 FMNL3Q8IVF7 1028 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 GIPC1O14908 333 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 IGHDP01880 384 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 DTHD1Q6ZMT9 781 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 ESYT1Q9BSJ8 1104 aa17.68■□□□□ 0.42
PRDM1-203ENST00000369096 GIGYF1O75420 1035 aaPredicted RBP17.67■□□□□ 0.42
PRDM1-203ENST00000369096 IQUBQ8NA54 791 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 STX10O60499 249 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 HARSP12081 509 aaKnown RBP17.67■□□□□ 0.42
PRDM1-203ENST00000369096 PDE1AP54750 535 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 NPHP3Q7Z494 1330 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 CCDC94Q9BW85 323 aaPredicted RBP17.67■□□□□ 0.42
PRDM1-203ENST00000369096 MBIPQ9NS73 344 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 FAM83GA6ND36 823 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 KRT5P13647 590 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 MCUR1Q96AQ8 359 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 TBC1D31Q96DN5 1066 aa17.67■□□□□ 0.42
PRDM1-203ENST00000369096 KRT2P35908 639 aa17.66■□□□□ 0.42
PRDM1-203ENST00000369096 CHST3Q7LGC8 479 aa17.66■□□□□ 0.42
PRDM1-203ENST00000369096 AFG3L2Q9Y4W6 797 aa17.66■□□□□ 0.42
PRDM1-203ENST00000369096 TEX14Q8IWB6 1497 aa17.66■□□□□ 0.42
PRDM1-203ENST00000369096 TRAF5O00463 557 aa17.66■□□□□ 0.42
PRDM1-203ENST00000369096 ZNF365Q70YC5 407 aa17.66■□□□□ 0.42
PRDM1-203ENST00000369096 B4GALNT4Q76KP1 1039 aa17.66■□□□□ 0.42
PRDM1-203ENST00000369096 VSIG1Q86XK7 387 aa17.66■□□□□ 0.42
PRDM1-203ENST00000369096 RNASE9P60153 205 aaKnown RBP17.66■□□□□ 0.42
PRDM1-203ENST00000369096 UTP14CQ5TAP6 766 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms