RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 VEGFAP15692 232 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 RALBP1Q15311 655 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 SIX5Q8N196 739 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 TMTC2Q8N394 836 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 PCDHGA11Q9Y5H2 935 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 PKD1L3Q7Z443 1732 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 CASKIN1Q8WXD9 1431 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 ADD1P35611 737 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 PTGIRP43119 386 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 CLDN10P78369 228 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 PTK7Q13308 1070 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 ANKMY2Q8IV38 441 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 CNPY4Q8N129 248 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 FAM122AQ96E09 287 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 ZFP42Q96MM3 310 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 TSEN34Q9BSV6 310 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 TERF2IPQ9NYB0 399 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 NOVA2Q9UNW9 492 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 RANBP2P49792 3224 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 AOC2O75106 756 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 PTMAP06454 111 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 CRTC2Q53ET0 693 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 CCDC102BQ68D86 513 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 TPCN2Q8NHX9 752 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 ZNF594Q96JF6 807 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 GNEQ9Y223 722 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 PASKQ96RG2 1323 aa4.62□□□□□ -1.67
ECHDC1-205ENST00000368295 TMEM88BA6NKF7 163 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 WASLO00401 505 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 CEP290O15078 2479 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 ZBTB7BO15156 539 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 RAB11FIP3O75154 756 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 ARHGEF15O94989 841 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 PROCP04070 461 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 GDF10P55107 478 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 RELBQ01201 579 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 SCARF1Q14162 830 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 NOP9Q86U38 636 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 AMIGO3Q86WK7 504 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 LINC00528Q8N1L1 170 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 AGBL1Q96MI9 1066 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 CLSPNQ9HAW4 1339 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 ARHGEF10LQ9HCE6 1279 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 KIAA1024Q9UPX6 916 aa4.61□□□□□ -1.67
ECHDC1-205ENST00000368295 KIF1AQ12756 1690 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 M0R2N6 131 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 BACH1O14867 736 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 EIF3JO75822 258 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 SEC13P55735 322 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 DPYDQ12882 1025 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 FAM50AQ14320 339 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 DEFB115Q30KQ5 88 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 CYP4F22Q6NT55 531 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 MRPL14Q6P1L8 145 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 GIMAP6Q6P9H5 292 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 SMC5Q8IY18 1101 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 FAM200AQ8TCP9 573 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 CNTNAP3BQ96NU0 1288 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 CNTNAP3Q9BZ76 1288 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 STK26Q9P289 416 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 RGPD8O14715 1765 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 CRYBG1Q9Y4K1 1723 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 NRXN1Q9ULB1 1477 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 SCNN1DP51172 638 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 CLN3Q13286 438 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 CCER1Q8TC90 406 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 XAGE2Q96GT9 111 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 NLRP3Q96P20 1036 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 ETNK1Q9HBU6 452 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 ZNF358Q9NW07 568 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 ZMIZ1Q9ULJ6 1067 aa4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 ABT1Q9ULW3 272 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 THRAP3Q9Y2W1 955 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 N4BP2Q86UW6 1770 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-205ENST00000368295 PKD1L2Q7Z442 2459 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 TTC28Q96AY4 2481 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 BRD4O60885 1362 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 RASSF10A6NK89 507 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 PHF20L1A8MW92 1017 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 MEN1O00255 615 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 SPINT1O43278 529 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 INHAP05111 366 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 BMP2P12643 396 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 DPEP1P16444 411 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 ZNF16P17020 682 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 VAMP1P23763 118 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 FMR1Q06787 632 aaKnown RBP eCLIP4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 APBB1IPQ7Z5R6 666 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 SGSM3Q96HU1 749 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 RAB6BQ9NRW1 208 aa4.59□□□□□ -1.67
ECHDC1-205ENST00000368295 USP6P35125 1406 aa4.59□□□□□ -1.68
ECHDC1-205ENST00000368295 QSER1Q2KHR3 1735 aa4.59□□□□□ -1.68
ECHDC1-205ENST00000368295 TRPM3Q9HCF6 1732 aaPredicted RBP4.59□□□□□ -1.68
ECHDC1-205ENST00000368295 A0A1W2PRU2 124 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 GLTPD2A6NH11 291 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 SFI1A8K8P3 1242 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 TMEM229AB2RXF0 380 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 PPFIA3O75145 1194 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 DKK1O94907 266 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 IL2RAP01589 272 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms