RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PCNX4Q63HM2 1172 aa8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 AGMOQ6ZNB7 445 aa8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 VPS37DQ86XT2 251 aa8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 ZNF296Q8WUU4 475 aaPredicted RBP8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 TOP2AP11388 1531 aaKnown RBP8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 ESRRAP11474 423 aaPredicted RBP8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 TFE3P19532 575 aaPredicted RBP8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 ATP2B1P20020 1258 aa8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 EPHA1P21709 976 aa8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 GMPRP36959 345 aa8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 RPS26P62854 115 aaKnown RBP8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 KRT76Q01546 638 aa8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 SRSF11Q05519 484 aaKnown RBP8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 CYB5RLQ6IPT4 315 aa8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 FBXL19Q6PCT2 694 aa8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 KCNQ5Q9NR82 932 aa8.62□□□□□ -1.03
RNU4-39P-201ENST00000362455 EPXP11678 715 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 ATF4P18848 351 aaPredicted RBP8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 GARTP22102 1010 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 LMNB2Q03252 620 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 CAMK2GQ13555 558 aaPredicted RBP8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 IKBKEQ14164 716 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 GRIK5Q16478 980 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 RASIP1Q5U651 963 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 RASGRP4Q8TDF6 673 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 ACDQ96AP0 544 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 EAF1Q96JC9 268 aaPredicted RBP8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 JPH1Q9HDC5 661 aaPredicted RBP8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 SUPT16HQ9Y5B9 1047 aaKnown RBP8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
RNU4-39P-201ENST00000362455 ARHGEF11O15085 1522 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 IFT140Q96RY7 1462 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 BMP6P22004 513 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 NME2P22392 152 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 CABP4P57796 275 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 SNAP47Q5SQN1 464 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 C20orf204Q6ZNR8 217 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 C1orf229Q6ZS94 237 aaPredicted RBP8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 MCF2L2Q86YR7 1114 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 CACTIN-AS1Q8N1I8 211 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 GOLM1Q8NBJ4 401 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 DHX38Q92620 1227 aaKnown RBP8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 SAMM50Q9Y512 469 aa8.6□□□□□ -1.03
RNU4-39P-201ENST00000362455 RIMBP3CA6NJZ7 1639 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 RIMBP3BA6NNM3 1639 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 RIMBP3Q9UFD9 1639 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 H3BRJ5 948 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 GREM1O60565 184 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 ADAMTS2O95450 1211 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 ALBP02768 609 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 FGRP09769 529 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 CDC25BP30305 580 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 GTF2F1P35269 517 aaKnown RBP eCLIP8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 SULF2Q8IWU5 870 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 IL22RA1Q8N6P7 574 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 STK35Q8TDR2 534 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 NT5C1AQ9BXI3 368 aa8.59□□□□□ -1.03
RNU4-39P-201ENST00000362455 AQRO60306 1485 aaKnown RBP eCLIP8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 SOX1O00570 391 aaPredicted RBP8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 LMNB1P20700 586 aa8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 BAG6P46379 1132 aa8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 AFF1P51825 1210 aaKnown RBP8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 TRIM42Q8IWZ5 723 aa8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 DNAJC2Q99543 621 aaKnown RBP8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 PCDHB5Q9Y5E4 795 aa8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 TOPBP1Q92547 1522 aa8.58□□□□□ -1.04
RNU4-39P-201ENST00000362455 ARNTP27540 789 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 HGSNATQ68CP4 663 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 TXNDC11Q6PKC3 985 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 ARMC5Q96C12 935 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 MIR1-1HGQ9H1L0 117 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 CBX8Q9HC52 389 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 CYP8B1Q9UNU6 501 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 PPME1Q9Y570 386 aa8.57□□□□□ -1.04
RNU4-39P-201ENST00000362455 M0R082 166 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 LILRB5O75023 590 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 SLURP2P0DP57 97 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 APOBRQ0VD83 1088 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 LRRC14Q15048 493 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 LLGL2Q6P1M3 1020 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 BNC2Q6ZN30 1099 aaPredicted RBP8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 FAM196AQ6ZSG2 479 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 CHSY3Q70JA7 882 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 GALNT6Q8NCL4 622 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 ZNF417Q8TAU3 575 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 GRIN3AQ8TCU5 1115 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 DDX54Q8TDD1 881 aaKnown RBP8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 SLC7A3Q8WY07 619 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 SEC16BQ96JE7 1060 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 ZNF587Q96SQ5 575 aaPredicted RBP8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 EMILIN2Q9BXX0 1053 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 GINM1Q9NU53 330 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms