RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 HELLSQ9NRZ9 838 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 STX8Q9UNK0 236 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 PA2G4Q9UQ80 394 aaKnown RBP8.12□□□□□ -1.11
RAB5B-201ENST00000360299 SETD1AO15047 1707 aaKnown RBP8.12□□□□□ -1.11
RAB5B-201ENST00000360299 USP19O94966 1318 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 CHMLP26374 656 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 METAP2P50579 478 aaKnown RBP eCLIP8.12□□□□□ -1.11
RAB5B-201ENST00000360299 DCAF15Q66K64 600 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 PAGR1Q9BTK6 254 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 VAT1LQ9HCJ6 419 aa8.12□□□□□ -1.11
RAB5B-201ENST00000360299 SLC9C2Q5TAH2 1124 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 TRMT1LQ7Z2T5 733 aaKnown RBP8.11□□□□□ -1.11
RAB5B-201ENST00000360299 MTERF4Q7Z6M4 381 aaKnown RBP8.11□□□□□ -1.11
RAB5B-201ENST00000360299 LINC00116Q8NCU8 138 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CUL5Q93034 780 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 TEKT1Q969V4 418 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 C3P01024 1663 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CTSWP56202 376 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 TSHZ3Q63HK5 1081 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 KRT26Q7Z3Y9 468 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CERS3Q8IU89 383 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 ACBD3Q9H3P7 528 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 EHMT1Q9H9B1 1298 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 RRAGCQ9HB90 399 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 MCM9Q9NXL9 1143 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CDK12Q9NYV4 1490 aaPredicted RBP8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CARMIL3Q8ND23 1372 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CCDC194A0A1B0GVG4 234 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 PRAMEF22A3QJZ6 481 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 UBE2HP62256 183 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 GCKRQ14397 625 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 SUPT20HL1Q3ZLR7 823 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 KANK3Q6NY19 840 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 KAT14Q9H8E8 782 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 KIF20AO95235 890 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 TSPY3P0CV98 308 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 TSPY8P0CW00 308 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CALM1P0DP23 149 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CALM2P0DP24 149 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 CALM3P0DP25 149 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 WTAPQ15007 396 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 FBXO3Q9UK99 471 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 NOD1Q9Y239 953 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 ADGRB2O60241 1585 aa8.11□□□□□ -1.11
RAB5B-201ENST00000360299 BAG4O95429 457 aaKnown RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 KLHL40Q2TBA0 621 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 TMC4Q7Z404 712 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 WDR66Q8TBY9 1149 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 GPR101Q96P66 508 aaPredicted RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 XDHP47989 1333 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 MAGEB6P1A0A0J9YX57 407 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 ZBTB43O43298 467 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 RBM25P49756 843 aaKnown RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 NLRP5P59047 1200 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 TFCP2Q12800 502 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 PUM3Q15397 648 aaKnown RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 TMEM266Q2M3C6 531 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 ZSCAN22P10073 491 aaPredicted RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 NAP1L1P55209 391 aaKnown RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 NMIQ13287 307 aaPredicted RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 BRF1Q92994 677 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 SLC4A4Q9Y6R1 1079 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 NBPF7P0C2Y1 421 aaPredicted RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 TBC1D22AQ8WUA7 517 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 USP26Q9BXU7 913 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 HEG1Q9ULI3 1381 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 CCT2P78371 535 aaKnown RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 CT47A1Q5JQC4 288 aaPredicted RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 GIGYF2Q6Y7W6 1299 aaKnown RBP8.1□□□□□ -1.11
RAB5B-201ENST00000360299 USP40Q9NVE5 1235 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 NRXN3Q9Y4C0 1643 aa8.1□□□□□ -1.11
RAB5B-201ENST00000360299 ANKRD26Q9UPS8 1709 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 FGFR1OPO95684 399 aaKnown RBP8.09□□□□□ -1.11
RAB5B-201ENST00000360299 LMNB1P20700 586 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 PRKAG2Q9UGJ0 569 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 ANGEL1Q9UNK9 670 aaKnown RBP8.09□□□□□ -1.11
RAB5B-201ENST00000360299 CCDC171Q6TFL3 1326 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 KLF18A0A0U1RQI7 1052 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 IREB2P48200 963 aaKnown RBP8.09□□□□□ -1.11
RAB5B-201ENST00000360299 DHX32Q7L7V1 743 aaKnown RBP8.09□□□□□ -1.11
RAB5B-201ENST00000360299 MAGEB6Q8N7X4 407 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 MAP7D2Q96T17 732 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 BRIP1Q9BX63 1249 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 TNNI3KQ59H18 835 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 TTC6Q86TZ1 520 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 SSH3Q8TE77 659 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 FPGT-TNNI3KV9GXZ4 949 aa8.09□□□□□ -1.11
RAB5B-201ENST00000360299 SYCE3A1L190 88 aa8.09□□□□□ -1.12
RAB5B-201ENST00000360299 HAND2P61296 217 aa8.09□□□□□ -1.12
RAB5B-201ENST00000360299 ATL3Q6DD88 541 aa8.09□□□□□ -1.12
RAB5B-201ENST00000360299 ZBTB38Q8NAP3 1195 aaPredicted RBP8.09□□□□□ -1.12
RAB5B-201ENST00000360299 CCDC148Q8NFR7 591 aa8.09□□□□□ -1.12
RAB5B-201ENST00000360299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.09□□□□□ -1.12
RAB5B-201ENST00000360299 REREQ9P2R6 1566 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 FMNL1O95466 1100 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-201ENST00000360299 SYCP1Q15431 976 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 UVSSAQ2YD98 709 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 CREB3L3Q68CJ9 461 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 VSIG10Q8N0Z9 540 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 KCNG4Q8TDN1 519 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms