RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 KCNQ4P56696 695 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 CCDC173Q0VFZ6 552 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 MAGEB6Q8N7X4 407 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 COL4A1P02462 1669 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 PTPDC1A2A3K4 754 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 PATL2C9JE40 543 aaKnown RBP21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 GNAT2P19087 354 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 BCAMP50895 628 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 BICDL1Q6ZP65 573 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 FAM43AQ8N2R8 423 aa21.53■■□□□ 1.04
PDLIM7-203ENST00000359895 ZNF804BA4D1E1 1349 aa21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 TIAM2Q8IVF5 1701 aa21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 SNAP23O00161 211 aa21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 DHX16O60231 1041 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 CHST3Q7LGC8 479 aa21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 FERMT3Q86UX7 667 aa21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 NLRP3Q96P20 1036 aa21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 RBSNQ9H1K0 784 aa21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 TSPY26PQ9H489 355 aa21.52■■□□□ 1.04
PDLIM7-203ENST00000359895 SALL1Q9NSC2 1324 aa21.52■■□□□ 1.03
PDLIM7-203ENST00000359895 CTDNEP1O95476 244 aa21.51■■□□□ 1.03
PDLIM7-203ENST00000359895 TPTE2Q6XPS3 522 aa21.51■■□□□ 1.03
PDLIM7-203ENST00000359895 NBPF5PQ86XG9 351 aaPredicted RBP21.51■■□□□ 1.03
PDLIM7-203ENST00000359895 DDX11Q96FC9 970 aa21.51■■□□□ 1.03
PDLIM7-203ENST00000359895 NAP1L2Q9ULW6 460 aaPredicted RBP21.51■■□□□ 1.03
PDLIM7-203ENST00000359895 CCT2P78371 535 aaKnown RBP21.5■■□□□ 1.03
PDLIM7-203ENST00000359895 RESTQ13127 1097 aa21.5■■□□□ 1.03
PDLIM7-203ENST00000359895 FAM182BQ5T319 152 aa21.5■■□□□ 1.03
PDLIM7-203ENST00000359895 C3orf67Q6ZVT6 689 aa21.5■■□□□ 1.03
PDLIM7-203ENST00000359895 PNPLA7Q6ZV29 1317 aa21.5■■□□□ 1.03
PDLIM7-203ENST00000359895 MBD4O95243 580 aa21.49■■□□□ 1.03
PDLIM7-203ENST00000359895 ANTXR2P58335 489 aa21.49■■□□□ 1.03
PDLIM7-203ENST00000359895 CAVIN4Q5BKX8 364 aa21.49■■□□□ 1.03
PDLIM7-203ENST00000359895 KRT27Q7Z3Y8 459 aa21.49■■□□□ 1.03
PDLIM7-203ENST00000359895 UPF1Q92900 1129 aaKnown RBP eCLIP21.49■■□□□ 1.03
PDLIM7-203ENST00000359895 PPP1R9BQ96SB3 815 aa21.49■■□□□ 1.03
PDLIM7-203ENST00000359895 SRP68Q9UHB9 627 aaKnown RBP21.49■■□□□ 1.03
PDLIM7-203ENST00000359895 MINPP1Q9UNW1 487 aa21.49■■□□□ 1.03
PDLIM7-203ENST00000359895 TTC6Q86TZ1 520 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 IFNL3Q8IZI9 196 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 NACAP1Q9BZK3 213 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 NBPF3Q9H094 633 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 NAPBQ9H115 298 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 LRP2BPQ9P2M1 347 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 KLF18A0A0U1RQI7 1052 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 SPATA32Q96LK8 384 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 ANKRD2Q9GZV1 360 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 CFAP45Q9UL16 551 aa21.48■■□□□ 1.03
PDLIM7-203ENST00000359895 SEMA3EO15041 775 aa21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 ATL3Q6DD88 541 aa21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 TBC1D10CQ8IV04 446 aa21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 RGS22Q8NE09 1264 aa21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 TMEM87BQ96K49 555 aa21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 NCOA5Q9HCD5 579 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 DENND2AQ9ULE3 1009 aa21.47■■□□□ 1.03
PDLIM7-203ENST00000359895 GOLGA8BA8MQT2 603 aa21.46■■□□□ 1.03
PDLIM7-203ENST00000359895 CELF1Q92879 486 aaKnown RBP21.46■■□□□ 1.03
PDLIM7-203ENST00000359895 TRIM44Q96DX7 344 aaPredicted RBP21.46■■□□□ 1.03
PDLIM7-203ENST00000359895 CNNM2Q9H8M5 875 aa21.46■■□□□ 1.03
PDLIM7-203ENST00000359895 ARMT1Q9H993 441 aa21.46■■□□□ 1.03
PDLIM7-203ENST00000359895 ANGEL1Q9UNK9 670 aaKnown RBP21.46■■□□□ 1.03
PDLIM7-203ENST00000359895 CARMIL3Q8ND23 1372 aa21.45■■□□□ 1.02
PDLIM7-203ENST00000359895 VPS37DQ86XT2 251 aa21.45■■□□□ 1.02
PDLIM7-203ENST00000359895 PDS5AQ29RF7 1337 aaKnown RBP21.45■■□□□ 1.02
PDLIM7-203ENST00000359895 GOLGA6L4A6NEF3 574 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 GSG1L2A8MUP6 293 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 RFC4P35249 363 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 GYG1P46976 350 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 TRAPPC3LQ5T215 181 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 FAM173BQ6P4H8 233 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 LEO1Q8WVC0 666 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 KRT23Q9C075 422 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 EPB41L4AQ9HCS5 686 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 GPHNQ9NQX3 736 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 CACNA1SQ13698 1873 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 CCDC88AQ3V6T2 1871 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 SH2B2O14492 632 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 ADRA2BP18089 450 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 BCL11BQ9C0K0 894 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 HPS5Q9UPZ3 1129 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 SLC4A4Q9Y6R1 1079 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 UBR3Q6ZT12 1888 aa21.44■■□□□ 1.02
PDLIM7-203ENST00000359895 MAST2Q6P0Q8 1798 aa21.43■■□□□ 1.02
PDLIM7-203ENST00000359895 CPLX1O14810 134 aa21.43■■□□□ 1.02
PDLIM7-203ENST00000359895 ZBTB22O15209 634 aa21.43■■□□□ 1.02
PDLIM7-203ENST00000359895 CYP7A1P22680 504 aa21.43■■□□□ 1.02
PDLIM7-203ENST00000359895 SMIM5Q71RC9 77 aa21.43■■□□□ 1.02
PDLIM7-203ENST00000359895 CYB5R4Q7L1T6 521 aa21.43■■□□□ 1.02
PDLIM7-203ENST00000359895 ZNF396Q96N95 335 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-203ENST00000359895 TFIP11Q9UBB9 837 aaKnown RBP21.43■■□□□ 1.02
PDLIM7-203ENST00000359895 TDO2P48775 406 aa21.42■■□□□ 1.02
PDLIM7-203ENST00000359895 AKNAD1Q5T1N1 836 aa21.42■■□□□ 1.02
PDLIM7-203ENST00000359895 TMED8Q6PL24 325 aaPredicted RBP21.42■■□□□ 1.02
PDLIM7-203ENST00000359895 FBXO33Q7Z6M2 555 aa21.42■■□□□ 1.02
PDLIM7-203ENST00000359895 LCORLQ8N3X6 602 aa21.42■■□□□ 1.02
PDLIM7-203ENST00000359895 FAM84BQ96KN1 310 aaPredicted RBP21.42■■□□□ 1.02
PDLIM7-203ENST00000359895 RAI14Q9P0K7 980 aa21.42■■□□□ 1.02
PDLIM7-203ENST00000359895 TNRC6CQ9HCJ0 1690 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms