RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 MCAMP43121 646 aa16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 MCTP1Q6DN14 999 aa16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 CYP46A1Q9Y6A2 500 aa16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 IRS2Q9Y4H2 1338 aa16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 ZNF512BQ96KM6 892 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 JAKMIP1Q96N16 626 aaKnown RBP16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 LIMCH1Q9UPQ0 1083 aa16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 RIMBP2O15034 1052 aa16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 ATP2B4P23634 1241 aa16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-201ENST00000359867 AK2P54819 239 aa16.46■□□□□ 0.23
CSNK1E-201ENST00000359867 RASGRF1Q13972 1273 aa16.46■□□□□ 0.23
CSNK1E-201ENST00000359867 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
CSNK1E-201ENST00000359867 RUFY3Q7L099 469 aa16.46■□□□□ 0.23
CSNK1E-201ENST00000359867 AKAP11Q9UKA4 1901 aa16.46■□□□□ 0.23
CSNK1E-201ENST00000359867 RPAP1Q9BWH6 1393 aaPredicted RBP16.46■□□□□ 0.23
CSNK1E-201ENST00000359867 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.22
CSNK1E-201ENST00000359867 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.22
CSNK1E-201ENST00000359867 ZMYM1Q5SVZ6 1142 aa16.46■□□□□ 0.22
CSNK1E-201ENST00000359867 PDRG1Q9NUG6 133 aa16.46■□□□□ 0.22
CSNK1E-201ENST00000359867 ISY1Q9ULR0 285 aaKnown RBP16.46■□□□□ 0.22
CSNK1E-201ENST00000359867 ARID4AP29374 1257 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 ZAP70P43403 619 aa16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 KRT32Q14532 448 aa16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 ALDH8A1Q9H2A2 487 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 RNF113AO15541 343 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 JAG2Q9Y219 1238 aa16.45■□□□□ 0.22
CSNK1E-201ENST00000359867 SNED1Q8TER0 1413 aa16.44■□□□□ 0.22
CSNK1E-201ENST00000359867 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
CSNK1E-201ENST00000359867 NASPP49321 788 aaPredicted RBP16.44■□□□□ 0.22
CSNK1E-201ENST00000359867 FBXO33Q7Z6M2 555 aa16.44■□□□□ 0.22
CSNK1E-201ENST00000359867 COL1A1P02452 1464 aaPredicted RBP16.44■□□□□ 0.22
CSNK1E-201ENST00000359867 CHGBP05060 677 aa16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 DSCC1Q9BVC3 393 aa16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 SH2B1Q9NRF2 756 aaPredicted RBP16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 FOXD4L5Q5VV16 416 aaPredicted RBP16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 CAVIN1Q6NZI2 390 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 SPATA5Q8NB90 893 aa16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 FOXD4L4Q8WXT5 416 aaPredicted RBP16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-201ENST00000359867 WASHC4Q2M389 1173 aa16.42■□□□□ 0.22
CSNK1E-201ENST00000359867 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
CSNK1E-201ENST00000359867 ANKRD1Q15327 319 aa16.42■□□□□ 0.22
CSNK1E-201ENST00000359867 BLOC1S2Q6QNY1 142 aa16.42■□□□□ 0.22
CSNK1E-201ENST00000359867 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
CSNK1E-201ENST00000359867 MYO5AQ9Y4I1 1855 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-201ENST00000359867 TPM2P07951 284 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 DOK7Q18PE1 504 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 BBXQ8WY36 941 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 ZC3H12CQ9C0D7 883 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 GNL3LQ9NVN8 582 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 CHAF1AQ13111 956 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 TTF1Q15361 905 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 C15orf52Q6ZUT6 534 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 ZNF804AQ7Z570 1209 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
CSNK1E-201ENST00000359867 CPA1P15085 419 aa16.4■□□□□ 0.22
CSNK1E-201ENST00000359867 RPS6KB1P23443 525 aa16.4■□□□□ 0.22
CSNK1E-201ENST00000359867 AOC3Q16853 763 aa16.4■□□□□ 0.22
CSNK1E-201ENST00000359867 CD209Q9NNX6 404 aa16.4■□□□□ 0.22
CSNK1E-201ENST00000359867 BRD1O95696 1058 aa16.4■□□□□ 0.22
CSNK1E-201ENST00000359867 DBNDD1Q9H9R9 158 aa16.4■□□□□ 0.22
CSNK1E-201ENST00000359867 PIH1D3Q9NQM4 214 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-201ENST00000359867 RBM27Q9P2N5 1060 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-201ENST00000359867 ZSCAN25Q6NSZ9 544 aa16.39■□□□□ 0.21
CSNK1E-201ENST00000359867 MAST3O60307 1309 aa16.39■□□□□ 0.21
CSNK1E-201ENST00000359867 CHD4Q14839 1912 aa16.39■□□□□ 0.21
CSNK1E-201ENST00000359867 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
CSNK1E-201ENST00000359867 EYA3Q99504 573 aa16.39■□□□□ 0.21
CSNK1E-201ENST00000359867 RTFDC1Q9BY42 306 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-201ENST00000359867 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.39■□□□□ 0.213e-7■■■□□ 15.9
CSNK1E-201ENST00000359867 ZNF277Q9NRM2 450 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-201ENST00000359867 CCDC173Q0VFZ6 552 aa16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 NEK1Q96PY6 1258 aa16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 IDH1O75874 414 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 TDRD7Q8NHU6 1098 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 APPBP2Q92624 585 aa16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 LMBRD1Q9NUN5 540 aa16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 ABCF2Q9UG63 623 aa16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
CSNK1E-201ENST00000359867 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
CSNK1E-201ENST00000359867 CYP21A2P08686 494 aa16.37■□□□□ 0.21
CSNK1E-201ENST00000359867 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms