RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CEBPAP49715 358 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 SMARCC1Q92922 1105 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-203ENST00000357654 CAPZA3Q96KX2 299 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 PRDM10Q9NQV6 1147 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 FAM114A2Q9NRY5 505 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 SLC5A4Q9NY91 659 aa6.52□□□□□ -1.37
BRCA1-203ENST00000357654 EIF4E1BA6NMX2 242 aaKnown RBP6.51□□□□□ -1.37
BRCA1-203ENST00000357654 ZSCAN12O43309 604 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 ZNF18P17022 549 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 PRPHP41219 470 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 DDB1Q16531 1140 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 CFAP36Q96G28 342 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 ZSCAN31Q96LW9 406 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-203ENST00000357654 EYA3Q99504 573 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 GBP3Q9H0R5 595 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 H7C1D1 291 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 CAPN9O14815 690 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 TRAPPC10P48553 1259 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 DNM2P50570 870 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SLC12A2P55011 1212 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 NXNQ6DKJ4 435 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 MMS19Q96T76 1030 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 LRRC27Q9C0I9 530 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 PDZRN3Q9UPQ7 1066 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 PLEKHG3A1L390 1219 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 IARSP41252 1262 aaKnown RBP6.51□□□□□ -1.37
BRCA1-203ENST00000357654 MAP3K11Q16584 847 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 CEP85LQ5SZL2 805 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SDCCAG8Q86SQ7 713 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-203ENST00000357654 RDH13Q8NBN7 331 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 DNAJC7Q99615 494 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 MMTAG2Q9BU76 263 aaKnown RBP6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SELENOOQ9BVL4 669 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 RBM27Q9P2N5 1060 aaKnown RBP6.51□□□□□ -1.37
BRCA1-203ENST00000357654 USP16Q9Y5T5 823 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 CNTLNQ9NXG0 1405 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SEMA3FQ13275 785 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 RPS6KA2Q15349 733 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 FBXW10Q5XX13 1052 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 NSMFQ6X4W1 530 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 PGBD3Q8N328 593 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SLC17A8Q8NDX2 589 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 GLG1Q92896 1179 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 MCM9Q9NXL9 1143 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 KLF15Q9UIH9 416 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 RABGAP1Q9Y3P9 1069 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 CEP164Q9UPV0 1460 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 PDS5BQ9NTI5 1447 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 H0YIN7 160 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 CALML3P27482 149 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 MCM2P49736 904 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 WTAPQ15007 396 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SCYL2Q6P3W7 929 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 NIM1KQ8IY84 436 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 PPP1R16BQ96T49 567 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 KRT23Q9C075 422 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SYTL2Q9HCH5 934 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SMIM24O75264 130 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 FSIP1Q8NA03 581 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 ARHGEF1Q92888 912 aaKnown RBP6.51□□□□□ -1.37
BRCA1-203ENST00000357654 ATP2A3Q93084 1043 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 ZNF653Q96CK0 615 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 GCNAQ96QF7 691 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 SUGT1Q9Y2Z0 365 aa6.51□□□□□ -1.37
BRCA1-203ENST00000357654 CIB2O75838 187 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 BAG6P46379 1132 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 TAF7Q15545 349 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 CLUL1Q15846 466 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 OTUD7BQ6GQQ9 843 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 TCP11L2Q8N4U5 519 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 KCNH5Q8NCM2 988 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 NSRP1Q9H0G5 558 aaKnown RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 PIDD1Q9HB75 910 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 MAP3K2Q9Y2U5 619 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 LMTK3Q96Q04 1460 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 MAGEB6P1A0A0J9YX57 407 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 ZBED4O75132 1171 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 CCDC122Q5T0U0 273 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 AFAP1L2Q8N4X5 818 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 HELBQ8NG08 1087 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 CCDC18Q5T9S5 1454 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 CASQ2O14958 399 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 UFL1O94874 794 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 MCM3P25205 808 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 ALDH3A1P30838 453 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 DNAJC21Q5F1R6 531 aaKnown RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 GKAP1Q5VSY0 366 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 ZGPATQ8N5A5 531 aaKnown RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 SCYL1Q96KG9 808 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 MLXIPQ9HAP2 919 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 ST7Q9NRC1 585 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 AMOTL2Q9Y2J4 779 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 GSTA1P08263 222 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 GSTA2P09210 222 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 CD19P15391 556 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 CLNS1AP54105 237 aaKnown RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 ZNF449Q6P9G9 518 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 KCNG4Q8TDN1 519 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 IFT81Q8WYA0 676 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms