RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 POLR3DP05423 398 aaPredicted RBP20.57■□□□□ 0.88
GYPC-202ENST00000356887 RBM6P78332 1123 aaKnown RBP20.57■□□□□ 0.88
GYPC-202ENST00000356887 ATP2B3Q16720 1220 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 RALYLQ86SE5 291 aaKnown RBP20.57■□□□□ 0.88
GYPC-202ENST00000356887 C16orf45Q96MC5 204 aaPredicted RBP20.57■□□□□ 0.88
GYPC-202ENST00000356887 SDF4Q9BRK5 362 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 NAT10Q9H0A0 1025 aaKnown RBP20.57■□□□□ 0.88
GYPC-202ENST00000356887 TMOD3Q9NYL9 352 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
GYPC-202ENST00000356887 MYH7P12883 1935 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 SMTNL1A8MU46 457 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 ADAMTS2O95450 1211 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 TNNT1P13805 278 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 SF3A1Q15459 793 aaKnown RBP20.57■□□□□ 0.88
GYPC-202ENST00000356887 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 DNAJC10Q8IXB1 793 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 RGS22Q8NE09 1264 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 ANKRD7Q92527 254 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 ERCC4Q92889 916 aaPredicted RBP20.57■□□□□ 0.88
GYPC-202ENST00000356887 ARID3AQ99856 593 aa20.57■□□□□ 0.88
GYPC-202ENST00000356887 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
GYPC-202ENST00000356887 CDHR2Q9BYE9 1310 aa20.56■□□□□ 0.88
GYPC-202ENST00000356887 NUTM2BA6NNL0 878 aaPredicted RBP20.56■□□□□ 0.88
GYPC-202ENST00000356887 NUTM2EB1AL46 878 aaPredicted RBP20.56■□□□□ 0.88
GYPC-202ENST00000356887 SPTLC2O15270 562 aa20.56■□□□□ 0.88
GYPC-202ENST00000356887 MCAMP43121 646 aa20.56■□□□□ 0.88
GYPC-202ENST00000356887 ARID5BQ14865 1188 aa20.56■□□□□ 0.88
GYPC-202ENST00000356887 NUTM2AQ8IVF1 878 aaPredicted RBP20.56■□□□□ 0.88
GYPC-202ENST00000356887 AOPEPQ8N6M6 819 aa20.56■□□□□ 0.88
GYPC-202ENST00000356887 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.56■□□□□ 0.88
GYPC-202ENST00000356887 KIAA1468Q9P260 1216 aa20.56■□□□□ 0.88
GYPC-202ENST00000356887 TPD52L1Q16890 204 aaPredicted RBP20.55■□□□□ 0.88
GYPC-202ENST00000356887 METTL24Q5JXM2 366 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 ZNF512BQ96KM6 892 aaPredicted RBP20.55■□□□□ 0.88
GYPC-202ENST00000356887 NBPF3Q9H094 633 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 AKAP11Q9UKA4 1901 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 KIF28PB7ZC32 967 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 CPLX1O14810 134 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 ADD2P35612 726 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 GIGYF2Q6Y7W6 1299 aaKnown RBP20.55■□□□□ 0.88
GYPC-202ENST00000356887 RAB11FIP4Q86YS3 637 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 SYNE4Q8N205 404 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 NEDD4P46934 1319 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 MAP3K15Q6ZN16 1313 aa20.55■□□□□ 0.88
GYPC-202ENST00000356887 KIF23Q02241 960 aaPredicted RBP20.54■□□□□ 0.88
GYPC-202ENST00000356887 TTLL11Q8NHH1 800 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 BPIFA3Q9BQP9 254 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 GJB4Q9NTQ9 266 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 ASAP1Q9ULH1 1129 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 PAXBP1Q9Y5B6 917 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 C4AP0C0L4 1744 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 C4BP0C0L5 1744 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 LDHAL6AQ6ZMR3 332 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 SYNE3Q6ZMZ3 975 aa20.54■□□□□ 0.88
GYPC-202ENST00000356887 ITGA6P23229 1130 aa20.53■□□□□ 0.88
GYPC-202ENST00000356887 AXDND1Q5T1B0 1012 aaPredicted RBP20.53■□□□□ 0.88
GYPC-202ENST00000356887 ANO1Q5XXA6 986 aa20.53■□□□□ 0.88
GYPC-202ENST00000356887 NLRP10Q86W26 655 aa20.53■□□□□ 0.88
GYPC-202ENST00000356887 PIGBQ92521 554 aa20.53■□□□□ 0.88
GYPC-202ENST00000356887 NRAPQ86VF7 1730 aa20.53■□□□□ 0.88
GYPC-202ENST00000356887 ATRNO75882 1429 aa20.52■□□□□ 0.88
GYPC-202ENST00000356887 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
GYPC-202ENST00000356887 SYCP1Q15431 976 aa20.52■□□□□ 0.88
GYPC-202ENST00000356887 HLFQ16534 295 aa20.52■□□□□ 0.88
GYPC-202ENST00000356887 GREM2Q9H772 168 aa20.52■□□□□ 0.88
GYPC-202ENST00000356887 ZMYM6O95789 1325 aa20.52■□□□□ 0.88
GYPC-202ENST00000356887 STARD3NLO95772 234 aa20.52■□□□□ 0.87
GYPC-202ENST00000356887 SKILP12757 684 aa20.52■□□□□ 0.87
GYPC-202ENST00000356887 CMA1P23946 247 aa20.52■□□□□ 0.87
GYPC-202ENST00000356887 CCZ1BP86790 482 aa20.52■□□□□ 0.87
GYPC-202ENST00000356887 CCZ1P86791 482 aaPredicted RBP20.52■□□□□ 0.87
GYPC-202ENST00000356887 TTF1Q15361 905 aaPredicted RBP20.52■□□□□ 0.87
GYPC-202ENST00000356887 SLC9C2Q5TAH2 1124 aa20.52■□□□□ 0.87
GYPC-202ENST00000356887 SMAP1Q8IYB5 467 aaPredicted RBP20.52■□□□□ 0.87
GYPC-202ENST00000356887 PDCL2Q8N4E4 241 aa20.52■□□□□ 0.87
GYPC-202ENST00000356887 VGLL2Q8N8G2 317 aa20.52■□□□□ 0.87
GYPC-202ENST00000356887 FBXW7Q969H0 707 aa20.52■□□□□ 0.87
GYPC-202ENST00000356887 ANGEL1Q9UNK9 670 aaKnown RBP20.52■□□□□ 0.87
GYPC-202ENST00000356887 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 ZNF202O95125 648 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 TRDNQ13061 729 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 UBE3CQ15386 1083 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 DPCR1Q3MIW9 517 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 PPP4R3BQ5MIZ7 849 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 CYB5R4Q7L1T6 521 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 FILIP1Q7Z7B0 1213 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 TBC1D10CQ8IV04 446 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 NKX2-3Q8TAU0 364 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 PIH1D3Q9NQM4 214 aaKnown RBP20.51■□□□□ 0.87
GYPC-202ENST00000356887 DENND2AQ9ULE3 1009 aa20.51■□□□□ 0.87
GYPC-202ENST00000356887 SH2B2O14492 632 aaPredicted RBP20.5■□□□□ 0.87
GYPC-202ENST00000356887 CTSWP56202 376 aa20.5■□□□□ 0.87
GYPC-202ENST00000356887 NBPF11Q86T75 865 aa20.5■□□□□ 0.87
GYPC-202ENST00000356887 CNNM1Q9NRU3 951 aa20.5■□□□□ 0.87
GYPC-202ENST00000356887 SLC3A2P08195 630 aaKnown RBP20.5■□□□□ 0.87
GYPC-202ENST00000356887 GPTP24298 496 aa20.5■□□□□ 0.87
GYPC-202ENST00000356887 NLRP12P59046 1061 aa20.5■□□□□ 0.87
GYPC-202ENST00000356887 SLC39A14Q15043 492 aa20.5■□□□□ 0.87
GYPC-202ENST00000356887 CEP135Q66GS9 1140 aa20.5■□□□□ 0.87
GYPC-202ENST00000356887 OSBPL5Q9H0X9 879 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms