RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 KIF1BPQ96EK5 621 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 A0A1W2PRG0 241 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 SH3BP5O60239 455 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 GADD45BO75293 160 aaPredicted RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 SKIP12755 728 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 TRIM21P19474 475 aaKnown RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 KIAA0753Q2KHM9 967 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 TMTC1Q8IUR5 882 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 TEX9Q8N6V9 391 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 MIS12Q9H081 205 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 SIL1Q9H173 461 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 CASQ2O14958 399 aaPredicted RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 POLE2P56282 527 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 PARP9Q8IXQ6 854 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 PDCD7Q8N8D1 485 aaKnown RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 CAPZA3Q96KX2 299 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 TANGO6Q9C0B7 1094 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 FAF1Q9UNN5 650 aaPredicted RBP5.66□□□□□ -1.5
SKP1-202ENST00000353411 UHRF1BP1LA0JNW5 1464 aa5.66□□□□□ -1.5
SKP1-202ENST00000353411 GSTTP1A0A1W2PQM5 241 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 EVI5O60447 810 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 RAB3IL1Q8TBN0 382 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 HOMER3Q9NSC5 361 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 U3KPZ7 1027 aaPredicted RBP5.65□□□□□ -1.5
SKP1-202ENST00000353411 ABCC2Q92887 1545 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 PAF1Q8N7H5 531 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 PARD6BQ9BYG5 372 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 NUP160Q12769 1436 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 COG7P83436 770 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 SMC1BQ8NDV3 1235 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 CDC23Q9UJX2 597 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 WWC3Q9ULE0 1092 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 TAF11Q15544 211 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 IFT81Q8WYA0 676 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 CCDC51Q96ER9 411 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 MPHOSPH6Q99547 160 aaKnown RBP5.65□□□□□ -1.5
SKP1-202ENST00000353411 TSKSQ9UJT2 592 aa5.65□□□□□ -1.5
SKP1-202ENST00000353411 TROQ12816 1431 aaPredicted RBP5.65□□□□□ -1.51
SKP1-202ENST00000353411 SLC8A3P57103 927 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 FANCCQ00597 558 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 CASP8Q14790 479 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 CCDC152Q4G0S7 254 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 ALS2CLQ60I27 953 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 YIPF3Q9GZM5 350 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 RMND1Q9NWS8 449 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 NPC1L1Q9UHC9 1359 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 PRXQ9BXM0 1461 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 DAPK1P53355 1430 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 TMPOP42166 694 aaKnown RBP5.65□□□□□ -1.51
SKP1-202ENST00000353411 CCDC122Q5T0U0 273 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 SWT1Q5T5J6 900 aaKnown RBP5.65□□□□□ -1.51
SKP1-202ENST00000353411 KLHDC4Q8TBB5 520 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 RABEP2Q9H5N1 569 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 PPANQ9NQ55 473 aaKnown RBP5.65□□□□□ -1.51
SKP1-202ENST00000353411 TULP2O00295 520 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 IDEP14735 1019 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 GYS2P54840 703 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 LAMB3Q13751 1172 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 AMOTQ4VCS5 1084 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 RRP36Q96EU6 259 aaKnown RBP5.65□□□□□ -1.51
SKP1-202ENST00000353411 PPP2R2CQ9Y2T4 447 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 SAR1BQ9Y6B6 198 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 ASXL1Q8IXJ9 1541 aa5.65□□□□□ -1.51
SKP1-202ENST00000353411 RGL2O15211 777 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 PLCB4Q15147 1175 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 CCDC197Q8NCU1 140 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 CDK5RAP3Q96JB5 506 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 TSPYL4Q9UJ04 414 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 ZBTB16Q05516 673 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 EXOC8Q8IYI6 725 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 MCUR1Q96AQ8 359 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 Q9H521 79 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 MTRF1LQ9UGC7 380 aaKnown RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 MAP4K4O95819 1239 aaPredicted RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 CETN2P41208 172 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 EGFL6Q8IUX8 553 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 CCDC26Q8TAB7 109 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 LZICQ8WZA0 190 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 GDAP1L1Q96MZ0 367 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 UIMC1Q96RL1 719 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 CARD10Q9BWT7 1032 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 EPRSP07814 1512 aaKnown RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 STX10O60499 249 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 ZNF131P52739 623 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 SND1Q7KZF4 910 aaKnown RBP eCLIP5.64□□□□□ -1.512e-12■■□□□ 11.8
SKP1-202ENST00000353411 UBLCP1Q8WVY7 318 aaPredicted RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 NKIRAS1Q9NYS0 192 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 AKR1B10O60218 316 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 MMP14P50281 582 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 NAIF1Q69YI7 327 aaPredicted RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 VSIG1Q86XK7 387 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 ANKRD24Q8TF21 1146 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 STXBP3O00186 592 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 TTC19Q6DKK2 380 aaPredicted RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 CACTINQ8WUQ7 758 aaKnown RBP5.64□□□□□ -1.51
SKP1-202ENST00000353411 LMBR1Q8WVP7 490 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 COG3Q96JB2 828 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 ZBTB40Q9NUA8 1239 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 POLKQ9UBT6 870 aa5.64□□□□□ -1.51
SKP1-202ENST00000353411 INF2Q27J81 1249 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms