RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 XAGE2Q96GT9 111 aa20.76■□□□□ 0.91
CTSB-202ENST00000353047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.76■□□□□ 0.91
CTSB-202ENST00000353047 ARHGAP31Q2M1Z3 1444 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 ERCC3P19447 782 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 CASP1P29466 404 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 PLIN2Q99541 437 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 HAUS7Q99871 368 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 TSPOAP1O95153 1857 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 KIF2AO00139 706 aaPredicted RBP20.75■□□□□ 0.91
CTSB-202ENST00000353047 FOXN1O15353 648 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 KRT40Q6A162 431 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 DDX41Q9UJV9 622 aaKnown RBP20.75■□□□□ 0.91
CTSB-202ENST00000353047 NFE2L3Q9Y4A8 694 aa20.75■□□□□ 0.91
CTSB-202ENST00000353047 ZSCAN12O43309 604 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 EPB41L2O43491 1005 aaKnown RBP20.74■□□□□ 0.91
CTSB-202ENST00000353047 CLCN6P51797 869 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 MYL5Q02045 173 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 ADALQ6DHV7 355 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 NAA16Q6N069 864 aaPredicted RBP20.74■□□□□ 0.91
CTSB-202ENST00000353047 C10orf67Q8IYJ2 551 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 CTDNEP1O95476 244 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 HOXB7P09629 217 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 IRX2Q9BZI1 471 aaPredicted RBP20.74■□□□□ 0.91
CTSB-202ENST00000353047 SLC52A2Q9HAB3 445 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 LRP2BPQ9P2M1 347 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 TBX22Q9Y458 520 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 ANKRD65E5RJM6 399 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 IL15P40933 162 aaPredicted RBP20.74■□□□□ 0.91
CTSB-202ENST00000353047 CAGE1Q8TC20 777 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 ANKRD7Q92527 254 aa20.74■□□□□ 0.91
CTSB-202ENST00000353047 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
CTSB-202ENST00000353047 CARMIL3Q8ND23 1372 aa20.73■□□□□ 0.91
CTSB-202ENST00000353047 SMYD4Q8IYR2 804 aaPredicted RBP20.73■□□□□ 0.91
CTSB-202ENST00000353047 EYA2O00167 538 aa20.73■□□□□ 0.91
CTSB-202ENST00000353047 PRDM1O75626 825 aa20.73■□□□□ 0.91
CTSB-202ENST00000353047 ARMCX5Q6P1M9 558 aa20.73■□□□□ 0.91
CTSB-202ENST00000353047 LINC00301Q8NCQ3 95 aa20.73■□□□□ 0.91
CTSB-202ENST00000353047 BAG1Q99933 345 aaPredicted RBP20.73■□□□□ 0.91
CTSB-202ENST00000353047 RANBP6O60518 1105 aaKnown RBP20.73■□□□□ 0.91
CTSB-202ENST00000353047 TSR1Q2NL82 804 aaKnown RBP20.73■□□□□ 0.91
CTSB-202ENST00000353047 SMARCE1Q969G3 411 aa20.73■□□□□ 0.91
CTSB-202ENST00000353047 JAG2Q9Y219 1238 aa20.73■□□□□ 0.91
CTSB-202ENST00000353047 TRMT112Q9UI30 125 aaKnown RBP20.72■□□□□ 0.91
CTSB-202ENST00000353047 PCDHA5Q9Y5H7 936 aa20.72■□□□□ 0.91
CTSB-202ENST00000353047 IBSPP21815 317 aaPredicted RBP20.72■□□□□ 0.91
CTSB-202ENST00000353047 CCZ1BP86790 482 aa20.72■□□□□ 0.91
CTSB-202ENST00000353047 CCZ1P86791 482 aaPredicted RBP20.72■□□□□ 0.91
CTSB-202ENST00000353047 KIF6Q6ZMV9 814 aa20.72■□□□□ 0.91
CTSB-202ENST00000353047 KCNH3Q9ULD8 1083 aa20.72■□□□□ 0.91
CTSB-202ENST00000353047 BTBD18B2RXH4 712 aa20.72■□□□□ 0.91
CTSB-202ENST00000353047 SSRP1Q08945 709 aaKnown RBP20.72■□□□□ 0.91
CTSB-202ENST00000353047 E4F1Q66K89 784 aaPredicted RBP20.72■□□□□ 0.91
CTSB-202ENST00000353047 UBAC1Q9BSL1 405 aa20.72■□□□□ 0.91
CTSB-202ENST00000353047 ARFGAP3Q9NP61 516 aa20.72■□□□□ 0.91
CTSB-202ENST00000353047 NAP1L1P55209 391 aaKnown RBP20.71■□□□□ 0.91
CTSB-202ENST00000353047 FBXO18Q8NFZ0 1043 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 CABP5Q9NP86 173 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 KIF28PB7ZC32 967 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 ETF1P62495 437 aaKnown RBP20.71■□□□□ 0.91
CTSB-202ENST00000353047 ZNF569Q5MCW4 686 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 VPS18Q9P253 973 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 NLRP12P59046 1061 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 NUP88Q99567 741 aaPredicted RBP20.71■□□□□ 0.91
CTSB-202ENST00000353047 NEO1Q92859 1461 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 OVOS2A0A0J9YW53 1432 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 OVOS2Q6IE36 1432 aa20.71■□□□□ 0.91
CTSB-202ENST00000353047 RAD21O60216 631 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 AXDND1Q5T1B0 1012 aaPredicted RBP20.7■□□□□ 0.9
CTSB-202ENST00000353047 UTP14CQ5TAP6 766 aaKnown RBP20.7■□□□□ 0.9
CTSB-202ENST00000353047 JAKMIP3Q5VZ66 844 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 KRBA2Q6ZNG9 492 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 DRC1Q96MC2 740 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 MPHOSPH8Q99549 860 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 COPRSQ9NQ92 184 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 CDKL5O76039 1030 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 MATR3P43243 847 aaKnown RBP eCLIP20.7■□□□□ 0.9
CTSB-202ENST00000353047 SCARF1Q14162 830 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 SART3Q15020 963 aaKnown RBP20.7■□□□□ 0.9
CTSB-202ENST00000353047 TERF2Q15554 542 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 WWC2Q6AWC2 1192 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 CCP110O43303 1012 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 CAPZA3Q96KX2 299 aa20.7■□□□□ 0.9
CTSB-202ENST00000353047 OAS2P29728 719 aaKnown RBP20.69■□□□□ 0.9
CTSB-202ENST00000353047 PPP2R3AQ06190 1150 aa20.69■□□□□ 0.9
CTSB-202ENST00000353047 FILIP1LQ4L180 1135 aa20.69■□□□□ 0.9
CTSB-202ENST00000353047 LLPHQ9BRT6 129 aaKnown RBP20.69■□□□□ 0.9
CTSB-202ENST00000353047 BABAM1Q9NWV8 329 aa20.69■□□□□ 0.9
CTSB-202ENST00000353047 ENOX2Q16206 610 aaKnown RBP20.69■□□□□ 0.9
CTSB-202ENST00000353047 ZNF609O15014 1411 aa20.69■□□□□ 0.9
CTSB-202ENST00000353047 FAM170AA1A519 330 aa20.69■□□□□ 0.9
CTSB-202ENST00000353047 CALCOCO1Q9P1Z2 691 aa20.69■□□□□ 0.9
CTSB-202ENST00000353047 CTIFO43310 598 aaKnown RBP20.68■□□□□ 0.9
CTSB-202ENST00000353047 BICDL1Q6ZP65 573 aa20.68■□□□□ 0.9
CTSB-202ENST00000353047 SERTAD1Q9UHV2 236 aa20.68■□□□□ 0.9
CTSB-202ENST00000353047 KIF5CO60282 957 aa20.68■□□□□ 0.9
CTSB-202ENST00000353047 VPS16Q9H269 839 aa20.68■□□□□ 0.9
CTSB-202ENST00000353047 ARMT1Q9H993 441 aa20.68■□□□□ 0.9
CTSB-202ENST00000353047 HELLSQ9NRZ9 838 aa20.68■□□□□ 0.9
CTSB-202ENST00000353047 MYO5BQ9ULV0 1848 aa20.68■□□□□ 0.9
CTSB-202ENST00000353047 LEKR1Q6ZMV7 388 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms