RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 FBF1Q8TES7 1133 aa17.18■□□□□ 0.34
COG3-201ENST00000349995 NAA15Q9BXJ9 866 aaKnown RBP17.18■□□□□ 0.34
COG3-201ENST00000349995 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
COG3-201ENST00000349995 CLASP1Q7Z460 1538 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 CYP2C19P33261 490 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 TUBB4BP68371 445 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 SAMM50Q9Y512 469 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 GIGYF2Q6Y7W6 1299 aaKnown RBP17.17■□□□□ 0.34
COG3-201ENST00000349995 SNRKQ9NRH2 765 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 SPHKAPQ2M3C7 1700 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 PNMA6EA0A0J9YXQ4 647 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 RNMTO43148 476 aaKnown RBP17.17■□□□□ 0.34
COG3-201ENST00000349995 ANKS4BQ8N8V4 417 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 UBAC1Q9BSL1 405 aa17.17■□□□□ 0.34
COG3-201ENST00000349995 IDH1O75874 414 aaKnown RBP17.16■□□□□ 0.34
COG3-201ENST00000349995 FANCCQ00597 558 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 KCNQ3O43525 872 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 CCDC82Q8N4S0 544 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 MTMR7Q9Y216 660 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 CCDC160A6NGH7 325 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 CHMLP26374 656 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 ARID5BQ14865 1188 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 TADA2BQ86TJ2 420 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 RIPOR2Q9Y4F9 1068 aa17.16■□□□□ 0.34
COG3-201ENST00000349995 HGSO14964 777 aaPredicted RBP17.15■□□□□ 0.34
COG3-201ENST00000349995 TBC1D31Q96DN5 1066 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
COG3-201ENST00000349995 METTL24Q5JXM2 366 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 ARFGAP2Q8N6H7 521 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 TDRD12Q587J7 1177 aaKnown RBP17.15■□□□□ 0.34
COG3-201ENST00000349995 HINFPQ9BQA5 517 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 IFIT1P09914 478 aaKnown RBP17.15■□□□□ 0.34
COG3-201ENST00000349995 NBPF7P0C2Y1 421 aaPredicted RBP17.15■□□□□ 0.34
COG3-201ENST00000349995 SETSIPP0DME0 302 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 ATP1A2P50993 1020 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 SRLQ86TD4 932 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
COG3-201ENST00000349995 ANKRD7Q92527 254 aa17.15■□□□□ 0.34
COG3-201ENST00000349995 LEO1Q8WVC0 666 aaPredicted RBP17.14■□□□□ 0.33
COG3-201ENST00000349995 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
COG3-201ENST00000349995 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
COG3-201ENST00000349995 DESI2Q9BSY9 194 aa17.14■□□□□ 0.33
COG3-201ENST00000349995 RBM8AQ9Y5S9 174 aaKnown RBP17.14■□□□□ 0.33
COG3-201ENST00000349995 ARHGAP6O43182 974 aa17.14■□□□□ 0.33
COG3-201ENST00000349995 VAV2P52735 878 aa17.14■□□□□ 0.33
COG3-201ENST00000349995 STX17P56962 302 aa17.14■□□□□ 0.33
COG3-201ENST00000349995 SND1Q7KZF4 910 aaKnown RBP eCLIP17.14■□□□□ 0.33
COG3-201ENST00000349995 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 ST5P78524 1137 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 ALS2CR12Q96Q35 445 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 TRIM6Q9C030 488 aaPredicted RBP17.13■□□□□ 0.33
COG3-201ENST00000349995 GEMIN8Q9NWZ8 242 aaKnown RBP17.13■□□□□ 0.33
COG3-201ENST00000349995 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 CCDC96Q2M329 555 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 DDX46Q7L014 1031 aaKnown RBP17.13■□□□□ 0.33
COG3-201ENST00000349995 CCDC50Q8IVM0 306 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
COG3-201ENST00000349995 NR1I2O75469 434 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 LONRF3Q496Y0 759 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 NEK1Q96PY6 1258 aa17.13■□□□□ 0.33
COG3-201ENST00000349995 NAPGQ99747 312 aaPredicted RBP17.13■□□□□ 0.33
COG3-201ENST00000349995 TLDC2A0PJX2 215 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
COG3-201ENST00000349995 MYL5Q02045 173 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 PPP1R13BQ96KQ4 1090 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 ATP8B1O43520 1251 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 MYO1BO43795 1136 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 GUCY2CP25092 1073 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 FAM71BQ8TC56 605 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 PARD6BQ9BYG5 372 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 EPC1Q9H2F5 836 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 IRAK4Q9NWZ3 460 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
COG3-201ENST00000349995 EHBP1Q8NDI1 1231 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 CAPS2Q9BXY5 557 aa17.12■□□□□ 0.33
COG3-201ENST00000349995 A0A087WWV3 80 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 E7EVH7 732 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 AKR1B10O60218 316 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 ALDH1L1O75891 902 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 IFIT5Q13325 482 aaKnown RBP17.11■□□□□ 0.33
COG3-201ENST00000349995 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 KLHDC4Q8TBB5 520 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 SELENOSQ9BQE4 189 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 PPANQ9NQ55 473 aaKnown RBP17.11■□□□□ 0.33
COG3-201ENST00000349995 ABCC4O15439 1325 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 SOS1Q07889 1333 aaPredicted RBP17.11■□□□□ 0.33
COG3-201ENST00000349995 ABCA9Q8IUA7 1624 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 SMIM23A6NLE4 172 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 RAD21O60216 631 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 MTX1Q13505 466 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■■□ 23.8
COG3-201ENST00000349995 MRFAP1L1Q96HT8 127 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 CWC25Q9NXE8 425 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms