RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
SMC4-201ENST00000344722 MXRA7P84157 204 aa20.35■□□□□ 0.85
SMC4-201ENST00000344722 RILPL1Q5EBL4 403 aa20.35■□□□□ 0.85
SMC4-201ENST00000344722 CTNND2Q9UQB3 1225 aa20.35■□□□□ 0.85
SMC4-201ENST00000344722 SYNRGQ9UMZ2 1314 aa20.35■□□□□ 0.85
SMC4-201ENST00000344722 PPP1R2P41236 205 aa20.35■□□□□ 0.85
SMC4-201ENST00000344722 TDRD7Q8NHU6 1098 aaKnown RBP20.35■□□□□ 0.85
SMC4-201ENST00000344722 LINS1Q8NG48 757 aa20.35■□□□□ 0.85
SMC4-201ENST00000344722 SECISBP2LQ93073 1101 aaKnown RBP20.35■□□□□ 0.85
SMC4-201ENST00000344722 IFIT1BQ5T764 474 aaKnown RBP20.34■□□□□ 0.85
SMC4-201ENST00000344722 SMC6Q96SB8 1091 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 CAPN7Q9Y6W3 813 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 TSPY2A6NKD2 308 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 WDR66Q8TBY9 1149 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 CCDC51Q96ER9 411 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 RTL9Q8NET4 1388 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 VIMP08670 466 aaKnown RBP20.34■□□□□ 0.85
SMC4-201ENST00000344722 GBP1P32455 592 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 EIF4A2Q14240 407 aaKnown RBP20.34■□□□□ 0.85
SMC4-201ENST00000344722 DAAM2Q86T65 1068 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 ATP5DP30049 168 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 PAK2Q13177 524 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 INTS8Q75QN2 995 aaKnown RBP20.34■□□□□ 0.85
SMC4-201ENST00000344722 NFE2L3Q9Y4A8 694 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
SMC4-201ENST00000344722 GOLGA8KD6RF30 607 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 PPFIA4O75335 1185 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 ZBTB16Q05516 673 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 MTMR6Q9Y217 621 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 PPP2R2CQ9Y2T4 447 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 PCK1P35558 622 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 RABGGTAQ92696 567 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 NUP58Q9BVL2 599 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 ADGRL1O94910 1474 aa20.33■□□□□ 0.85
SMC4-201ENST00000344722 CCDC160A6NGH7 325 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 IDI1Q13907 227 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 SND1Q7KZF4 910 aaKnown RBP eCLIP20.33■□□□□ 0.846e-9■■■■■ 32.8
SMC4-201ENST00000344722 DZIP1Q86YF9 867 aaKnown RBP20.33■□□□□ 0.84
SMC4-201ENST00000344722 BANK1Q8NDB2 785 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 SMIM23A6NLE4 172 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 CALM1P0DP23 149 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 CALM2P0DP24 149 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 CALM3P0DP25 149 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 RABEP2Q9H5N1 569 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 RAPGEF6Q8TEU7 1601 aa20.33■□□□□ 0.84
SMC4-201ENST00000344722 ABCC2Q92887 1545 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 IQCGQ9H095 443 aaKnown RBP20.32■□□□□ 0.84
SMC4-201ENST00000344722 VPS16Q9H269 839 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 CROCCP2Q86T23 111 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 TRMT112Q9UI30 125 aaKnown RBP20.32■□□□□ 0.84
SMC4-201ENST00000344722 MRVI1Q9Y6F6 885 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 SHANK2Q9UPX8 1470 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 RIMS2Q9UQ26 1411 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 NR1I2O75469 434 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 CALML3P27482 149 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 FCHSD1Q86WN1 690 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 PPP1R14CQ8TAE6 165 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 KCNK9Q9NPC2 374 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 KIAA1468Q9P260 1216 aa20.32■□□□□ 0.84
SMC4-201ENST00000344722 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
SMC4-201ENST00000344722 ALDH3A1P30838 453 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 ACTN2P35609 894 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 GNGT1P63211 74 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 ABCC4O15439 1325 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 GRIPAP1Q4V328 841 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 CYB5RLQ6IPT4 315 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 EFCAB13Q8IY85 973 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 ARID5AQ03989 594 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 ADALQ6DHV7 355 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 DNMT1P26358 1616 aaKnown RBP20.31■□□□□ 0.84
SMC4-201ENST00000344722 NEBLO76041 1014 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 RAPGEF3O95398 923 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 SNRPA1P09661 255 aaKnown RBP20.31■□□□□ 0.84
SMC4-201ENST00000344722 ME3Q16798 604 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 PROSER2Q86WR7 435 aaPredicted RBP20.31■□□□□ 0.84
SMC4-201ENST00000344722 PPP1R13BQ96KQ4 1090 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 WWC3Q9ULE0 1092 aa20.31■□□□□ 0.84
SMC4-201ENST00000344722 ATP2A1O14983 1001 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 MTHFSDQ2M296 383 aaKnown RBP20.3■□□□□ 0.84
SMC4-201ENST00000344722 CACNA2D3Q8IZS8 1091 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 TBCAO75347 108 aaKnown RBP20.3■□□□□ 0.84
SMC4-201ENST00000344722 GNAQP50148 359 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 TBC1D8BQ0IIM8 1120 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 TSKSQ9UJT2 592 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 TSNAXIP1Q2TAA8 658 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 CEP85LQ5SZL2 805 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 SEC62Q99442 399 aaKnown RBP20.3■□□□□ 0.84
SMC4-201ENST00000344722 ZBTB3Q9H5J0 574 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 NKIRAS1Q9NYS0 192 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 E7EVH7 732 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 NOX5Q96PH1 765 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 CAPS2Q9BXY5 557 aa20.3■□□□□ 0.84
SMC4-201ENST00000344722 FAM135BQ49AJ0 1406 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 KDM5BQ9UGL1 1544 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 TERF2Q15554 542 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 CUL5Q93034 780 aa20.29■□□□□ 0.84
SMC4-201ENST00000344722 NAP1L3Q99457 506 aaPredicted RBP20.29■□□□□ 0.84
SMC4-201ENST00000344722 STMN2Q93045 179 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms