RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 FAM205AQ6ZU69 1335 aa17.6■□□□□ 0.41
CXCL12-201ENST00000343575 GPAA1O43292 621 aa17.6■□□□□ 0.41
CXCL12-201ENST00000343575 HSPD1P10809 573 aaKnown RBP17.6■□□□□ 0.41
CXCL12-201ENST00000343575 MECOMQ03112 1051 aa17.6■□□□□ 0.41
CXCL12-201ENST00000343575 SCN9AQ15858 1988 aa17.59■□□□□ 0.41
CXCL12-201ENST00000343575 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
CXCL12-201ENST00000343575 AOC3Q16853 763 aa17.59■□□□□ 0.41
CXCL12-201ENST00000343575 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
CXCL12-201ENST00000343575 RTKN2Q8IZC4 609 aa17.59■□□□□ 0.41
CXCL12-201ENST00000343575 PSMD1Q99460 953 aa17.59■□□□□ 0.41
CXCL12-201ENST00000343575 DBNDD1Q9H9R9 158 aa17.59■□□□□ 0.41
CXCL12-201ENST00000343575 TAF6LQ9Y6J9 622 aa17.59■□□□□ 0.41
CXCL12-201ENST00000343575 CYP7A1P22680 504 aa17.58■□□□□ 0.41
CXCL12-201ENST00000343575 GTF2IP78347 998 aa17.58■□□□□ 0.41
CXCL12-201ENST00000343575 GRIPAP1Q4V328 841 aa17.58■□□□□ 0.41
CXCL12-201ENST00000343575 STRBPQ96SI9 672 aaKnown RBP17.58■□□□□ 0.41
CXCL12-201ENST00000343575 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.41
CXCL12-201ENST00000343575 COL4A5P29400 1685 aa17.58■□□□□ 0.41
CXCL12-201ENST00000343575 SRCAPQ6ZRS2 3230 aa17.58■□□□□ 0.4
CXCL12-201ENST00000343575 SNX14Q9Y5W7 946 aa17.58■□□□□ 0.4
CXCL12-201ENST00000343575 ZNF646O15015 1829 aaPredicted RBP17.57■□□□□ 0.4
CXCL12-201ENST00000343575 ANAPC15P60006 121 aa17.57■□□□□ 0.4
CXCL12-201ENST00000343575 CERS5Q8N5B7 392 aa17.57■□□□□ 0.4
CXCL12-201ENST00000343575 MIGA1Q8NAN2 632 aa17.57■□□□□ 0.4
CXCL12-201ENST00000343575 RIOK1Q9BRS2 568 aaKnown RBP17.57■□□□□ 0.4
CXCL12-201ENST00000343575 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.57■□□□□ 0.4
CXCL12-201ENST00000343575 SLC27A2O14975 620 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 MBD4O95243 580 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 COL9A3Q14050 684 aaPredicted RBP17.56■□□□□ 0.4
CXCL12-201ENST00000343575 MFSD14BQ5SR56 506 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 CREB3L3Q68CJ9 461 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 NAA16Q6N069 864 aaPredicted RBP17.56■□□□□ 0.4
CXCL12-201ENST00000343575 PODNQ7Z5L7 613 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 LCORLQ8N3X6 602 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 MXD3Q9BW11 206 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 ARMT1Q9H993 441 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 ECE2O60344 883 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 CD2BP2O95400 341 aaKnown RBP17.56■□□□□ 0.4
CXCL12-201ENST00000343575 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
CXCL12-201ENST00000343575 SUPT20HQ8NEM7 779 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
CXCL12-201ENST00000343575 CCDC88AQ3V6T2 1871 aa17.56■□□□□ 0.4
CXCL12-201ENST00000343575 MAST2Q6P0Q8 1798 aa17.55■□□□□ 0.4
CXCL12-201ENST00000343575 YDJCA8MPS7 323 aa17.55■□□□□ 0.4
CXCL12-201ENST00000343575 LDHBP07195 334 aaKnown RBP17.55■□□□□ 0.4
CXCL12-201ENST00000343575 MCCP23508 829 aa17.55■□□□□ 0.4
CXCL12-201ENST00000343575 ADCK5Q3MIX3 580 aa17.55■□□□□ 0.4
CXCL12-201ENST00000343575 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
CXCL12-201ENST00000343575 TTLL5Q6EMB2 1281 aa17.55■□□□□ 0.4
CXCL12-201ENST00000343575 AIDAQ96BJ3 306 aa17.55■□□□□ 0.4
CXCL12-201ENST00000343575 PPIP5K2O43314 1243 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 PRKAB2O43741 272 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 FGAP02671 866 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 CYP21A2P08686 494 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 DIXDC1Q155Q3 683 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 SOGA3Q5TF21 947 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 FHDC1Q9C0D6 1143 aaPredicted RBP17.54■□□□□ 0.4
CXCL12-201ENST00000343575 BCS1LQ9Y276 419 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
CXCL12-201ENST00000343575 NFKBIEO00221 500 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 DYNLL1P63167 89 aaKnown RBP17.54■□□□□ 0.4
CXCL12-201ENST00000343575 TBC1D22AQ8WUA7 517 aa17.54■□□□□ 0.4
CXCL12-201ENST00000343575 GSG1L2A8MUP6 293 aa17.53■□□□□ 0.4
CXCL12-201ENST00000343575 IGSF3O75054 1194 aa17.53■□□□□ 0.4
CXCL12-201ENST00000343575 RABEP1Q15276 862 aa17.53■□□□□ 0.4
CXCL12-201ENST00000343575 TSGA10IPQ3SY00 556 aa17.53■□□□□ 0.4
CXCL12-201ENST00000343575 EPB41L4AQ9HCS5 686 aaPredicted RBP17.53■□□□□ 0.4
CXCL12-201ENST00000343575 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
CXCL12-201ENST00000343575 TMED8Q6PL24 325 aaPredicted RBP17.52■□□□□ 0.4
CXCL12-201ENST00000343575 DZIP1Q86YF9 867 aaKnown RBP17.52■□□□□ 0.4
CXCL12-201ENST00000343575 TBC1D2Q9BYX2 928 aa17.52■□□□□ 0.4
CXCL12-201ENST00000343575 UTRNP46939 3433 aa17.52■□□□□ 0.4
CXCL12-201ENST00000343575 MAGEB6P1A0A0J9YX57 407 aa17.52■□□□□ 0.39
CXCL12-201ENST00000343575 G3V3G9 751 aa17.52■□□□□ 0.39
CXCL12-201ENST00000343575 PRELPP51888 382 aa17.52■□□□□ 0.39
CXCL12-201ENST00000343575 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.39
CXCL12-201ENST00000343575 MYH2Q9UKX2 1941 aa17.52■□□□□ 0.39
CXCL12-201ENST00000343575 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
CXCL12-201ENST00000343575 PATL2C9JE40 543 aaKnown RBP17.51■□□□□ 0.39
CXCL12-201ENST00000343575 STRIP1Q5VSL9 837 aa17.51■□□□□ 0.39
CXCL12-201ENST00000343575 STOX1Q6ZVD7 989 aa17.51■□□□□ 0.39
CXCL12-201ENST00000343575 UPF3BQ9BZI7 483 aaKnown RBP17.51■□□□□ 0.39
CXCL12-201ENST00000343575 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
CXCL12-201ENST00000343575 AATFQ9NY61 560 aaKnown RBP eCLIP17.51■□□□□ 0.39
CXCL12-201ENST00000343575 RPAP1Q9BWH6 1393 aaPredicted RBP17.5■□□□□ 0.39
CXCL12-201ENST00000343575 ALX1Q15699 326 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 FBXW7Q969H0 707 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 SNX21Q969T3 373 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 FAM163AQ96GL9 167 aaPredicted RBP17.5■□□□□ 0.39
CXCL12-201ENST00000343575 SYT17Q9BSW7 474 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 SUGT1Q9Y2Z0 365 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 CPA1P15085 419 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
CXCL12-201ENST00000343575 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 SDR42E1Q8WUS8 393 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 NBPF3Q9H094 633 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 TAOK3Q9H2K8 898 aa17.5■□□□□ 0.39
CXCL12-201ENST00000343575 SLC4A4Q9Y6R1 1079 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms