RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 TRMT112Q9UI30 125 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 RIPOR2Q9Y4F9 1068 aa11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 CSF1RP07333 972 aa11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 CDC25BP30305 580 aa11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 KCNG4Q8TDN1 519 aa11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.577e-13■■■□□ 17.9
UBE2D3-203ENST00000343106 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 V9GYY5 206 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 SCN11AQ9UI33 1791 aa11.5□□□□□ -0.57
UBE2D3-203ENST00000343106 WDHD1O75717 1129 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 STARD3NLO95772 234 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 PHKA1P46020 1223 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 METAP2P50579 478 aaKnown RBP eCLIP11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 EVCP57679 992 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 KIF23Q02241 960 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 ANO1Q5XXA6 986 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 CCDC82Q8N4S0 544 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 CCDC112Q8NEF3 446 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 ALG1Q9BT22 464 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 CARD10Q9BWT7 1032 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 IFNKQ9P0W0 207 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 CPDO75976 1380 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 ANKRD18BA2A2Z9 1011 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 IRS4O14654 1257 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 PFKFB1P16118 471 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 CDC27P30260 824 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 PTPN21Q16825 1174 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 CHMP4CQ96CF2 233 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 CLIC6Q96NY7 704 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 WWC3Q9ULE0 1092 aa11.49□□□□□ -0.57
UBE2D3-203ENST00000343106 SMTNL1A8MU46 457 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 ADD2P35612 726 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 NCBP1Q09161 790 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 XPO4Q9C0E2 1151 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 TOMM22Q9NS69 142 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 POLR3EQ9NVU0 708 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 ANGEL1Q9UNK9 670 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 A0A1W2PQ27 194 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 A0A1W2PQ64 194 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 A0A1W2PQD8 194 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 NPHP1O15259 732 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 CTIFO43310 598 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 LMOD1P29536 600 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 SPECC1Q5M775 1068 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 GIGYF2Q6Y7W6 1299 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 TMC6Q7Z403 805 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 BRAPQ7Z569 592 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 NBPF11Q86T75 865 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
UBE2D3-203ENST00000343106 ALS2Q96Q42 1657 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 YEATS4O95619 227 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 CTSWP56202 376 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 CCZ1BP86790 482 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 CCZ1P86791 482 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 TRIM28Q13263 835 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 RRP12Q5JTH9 1297 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 KRT40Q6A162 431 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 VPS37DQ86XT2 251 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 FBXL16Q8N461 479 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 ARFGEF2Q9Y6D5 1785 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 MAP3K15Q6ZN16 1313 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 HSP90AA4PQ58FG1 418 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 PKNOX2Q96KN3 472 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 SLAIN2Q9P270 581 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 ZNF142P52746 1687 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 AFDNP55196 1824 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-203ENST00000343106 MROH7-TTC4A0A0A0MT08 1334 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 NEDD4P46934 1319 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 ATP1A3P13637 1013 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 PDE6AP16499 860 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 SYKP43405 635 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 TMEM67Q5HYA8 995 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 TICAM2Q86XR7 235 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 CMTR1Q8N1G2 835 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 ANKRD7Q92527 254 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 ZBTB1Q9Y2K1 713 aa11.46□□□□□ -0.57
UBE2D3-203ENST00000343106 KIF1AQ12756 1690 aa11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 SH2B2O14492 632 aaPredicted RBP11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 ZBTB43O43298 467 aa11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 NEMFO60524 1076 aa11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 PDE8BO95263 885 aa11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 CMA1P23946 247 aa11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 PNOCQ13519 176 aa11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 APOA5Q6Q788 366 aa11.46□□□□□ -0.58
UBE2D3-203ENST00000343106 MAGEB6Q8N7X4 407 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms