RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 NAPAP54920 295 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 TNIP1Q15025 636 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 BANK1Q8NDB2 785 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 EIF4A1P60842 406 aaKnown RBP9.15□□□□□ -0.94
UBE4B-202ENST00000343090 ME3Q16798 604 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 BRAPQ7Z569 592 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 ARMT1Q9H993 441 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 MCM9Q9NXL9 1143 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 KRT2P35908 639 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 CHMP4BP1P59074 171 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 ARID5AQ03989 594 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 LRMPQ12912 555 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 ZNF174Q15697 407 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-202ENST00000343090 CAPZA3Q96KX2 299 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 CTAGE1Q96RT6 745 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 SETDB2Q96T68 719 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 PYM1Q9BRP8 204 aaKnown RBP9.15□□□□□ -0.94
UBE4B-202ENST00000343090 CTAGE15A4D2H0 777 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 CTAGE8P0CG41 777 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 ITGA6P23229 1130 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 EVCP57679 992 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 TERF2Q15554 542 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 MAATS1Q7Z4T9 603 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 NBPF11Q86T75 865 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 CTAGE6Q86UF2 777 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 CTAGE4Q8IX94 777 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 IL17REQ8NFR9 667 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 PLBD2Q8NHP8 589 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 CLSTN2Q9H4D0 955 aa9.15□□□□□ -0.94
UBE4B-202ENST00000343090 AOX1Q06278 1338 aa9.15□□□□□ -0.95
UBE4B-202ENST00000343090 UGGT1Q9NYU2 1555 aa9.15□□□□□ -0.95
UBE4B-202ENST00000343090 BRD1O95696 1058 aa9.15□□□□□ -0.95
UBE4B-202ENST00000343090 CCDC175P0C221 793 aa9.15□□□□□ -0.95
UBE4B-202ENST00000343090 ZNF521Q96K83 1311 aa9.15□□□□□ -0.95
UBE4B-202ENST00000343090 ERVK-7P63135 1459 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 GCKRQ14397 625 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 GOLGA1Q92805 767 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 NLRP3Q96P20 1036 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 GUCA1BQ9UMX6 200 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 VWA3AA6NCI4 1184 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 UBXN1Q04323 297 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 MICALCLQ6ZW33 695 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 GOLGA6L7A0A1B0GV03 622 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 PSMA7O14818 248 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 BMP15O95972 392 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 TUBB4AP04350 444 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 CCT6AP40227 531 aaKnown RBP9.14□□□□□ -0.95
UBE4B-202ENST00000343090 ZNF569Q5MCW4 686 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 PPM1EQ8WY54 764 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 PHKBQ93100 1093 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 ZNF622Q969S3 477 aaKnown RBP eCLIP9.14□□□□□ -0.954e-7■■■□□ 17.2
UBE4B-202ENST00000343090 ZNF496Q96IT1 587 aaPredicted RBP9.14□□□□□ -0.95
UBE4B-202ENST00000343090 C19orf44Q9H6X5 657 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 TBX22Q9Y458 520 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 ATP10AO60312 1499 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 MBD5Q9P267 1494 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 GSTTP1A0A1W2PQM5 241 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 GPAA1O43292 621 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 RHOXF2BP0C7M4 288 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 SF3B2Q13435 895 aaKnown RBP9.14□□□□□ -0.95
UBE4B-202ENST00000343090 SYCP3Q8IZU3 236 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 PDLIM2Q96JY6 352 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 SEC62Q99442 399 aaKnown RBP9.14□□□□□ -0.95
UBE4B-202ENST00000343090 RHOXF2Q9BQY4 288 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 SAMM50Q9Y512 469 aa9.14□□□□□ -0.95
UBE4B-202ENST00000343090 TAF5LO75529 589 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 PRDM1O75626 825 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 HSPA2P54652 639 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 ANO1Q5XXA6 986 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 GBP6Q6ZN66 633 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 A0A0D9SFI3 127 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 MYL5Q02045 173 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 ERCC6LQ2NKX8 1250 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 SLC52A2Q9HAB3 445 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 CTAGE9A4FU28 777 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 HLA-DOAP06340 250 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 CYLC1P35663 651 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-202ENST00000343090 HNRNPH2P55795 449 aaKnown RBP9.13□□□□□ -0.95
UBE4B-202ENST00000343090 GSTO1P78417 241 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 CTDSPL2Q05D32 466 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 DDB1Q16531 1140 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 UNC5CLQ8IV45 518 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 PAF1Q8N7H5 531 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 MAPK8IP1Q9UQF2 711 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 ELP1O95163 1332 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 KBTBD3Q8NAB2 608 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 KIAA1524Q8TCG1 905 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 NAA15Q9BXJ9 866 aaKnown RBP9.13□□□□□ -0.95
UBE4B-202ENST00000343090 RTL9Q8NET4 1388 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 KIAA0232Q92628 1395 aa9.13□□□□□ -0.95
UBE4B-202ENST00000343090 GNAT2P19087 354 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 GBP2P32456 591 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-202ENST00000343090 MAP2K1Q02750 393 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-202ENST00000343090 SPAG1Q07617 926 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 SPAG5Q96R06 1193 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 EFCC1Q9HA90 598 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 NSFL1CQ9UNZ2 370 aaKnown RBP9.12□□□□□ -0.95
UBE4B-202ENST00000343090 PCDH11XQ9BZA7 1347 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms