RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 CPA1P15085 419 aa18.61■□□□□ 0.57
CDC42BPG-201ENST00000342711 AKAP4Q5JQC9 854 aa18.61■□□□□ 0.57
CDC42BPG-201ENST00000342711 RBSNQ9H1K0 784 aa18.61■□□□□ 0.57
CDC42BPG-201ENST00000342711 CTNND2Q9UQB3 1225 aa18.61■□□□□ 0.57
CDC42BPG-201ENST00000342711 RAPGEF1Q13905 1077 aa18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 IQUBQ8NA54 791 aa18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 ELP1O95163 1332 aa18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 FANCAO15360 1455 aa18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 ZCRB1Q8TBF4 217 aaKnown RBP18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 MRPS9P82933 396 aaKnown RBP18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 PAXIP1Q6ZW49 1069 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 HS2ST1Q7LGA3 356 aa18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 SEC62Q99442 399 aaKnown RBP18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 MCM9Q9NXL9 1143 aa18.6■□□□□ 0.57
CDC42BPG-201ENST00000342711 SETDB2Q96T68 719 aa18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 NDC80O14777 642 aa18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 ATP6V1AP38606 617 aa18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 EIF4A2Q14240 407 aaKnown RBP18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 MTHFSDQ2M296 383 aaKnown RBP18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 ZBTB40Q9NUA8 1239 aa18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 DCAF17Q5H9S7 520 aaPredicted RBP18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 VWA3AA6NCI4 1184 aa18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 VAMP4O75379 141 aa18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 SETDB1Q15047 1291 aa18.59■□□□□ 0.57
CDC42BPG-201ENST00000342711 ZNF174Q15697 407 aa18.58■□□□□ 0.57
CDC42BPG-201ENST00000342711 ZKSCAN3Q9BRR0 538 aa18.58■□□□□ 0.57
CDC42BPG-201ENST00000342711 DENND4BO75064 1496 aaPredicted RBP18.58■□□□□ 0.57
CDC42BPG-201ENST00000342711 FAM160A1Q05DH4 1040 aa18.58■□□□□ 0.57
CDC42BPG-201ENST00000342711 KRBA2Q6ZNG9 492 aa18.58■□□□□ 0.57
CDC42BPG-201ENST00000342711 ERO1AQ96HE7 468 aa18.58■□□□□ 0.57
CDC42BPG-201ENST00000342711 TUBBP07437 444 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 CALCOCO2Q13137 446 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 MAP7D1Q3KQU3 841 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 ZNF804AQ7Z570 1209 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 HELBQ8NG08 1087 aaPredicted RBP18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 LINS1Q8NG48 757 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 NIP7Q9Y221 180 aaKnown RBP eCLIP18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 KRT24Q2M2I5 525 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 CFAP57Q96MR6 1250 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 NLRP3Q96P20 1036 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 ANAPC4Q9UJX5 808 aa18.58■□□□□ 0.56
CDC42BPG-201ENST00000342711 ZBTB21Q9ULJ3 1066 aa18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 ATP2A2P16615 1042 aaKnown RBP18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 MTUS1Q9ULD2 1270 aa18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 CEP83Q9Y592 693 aa18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 PPIP5K1Q6PFW1 1433 aa18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 RAD50Q92878 1312 aa18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 GNA11P29992 359 aa18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 GPATCH8Q9UKJ3 1502 aaKnown RBP18.57■□□□□ 0.56
CDC42BPG-201ENST00000342711 SEL1L2Q5TEA6 688 aa18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 IGSF22Q8N9C0 903 aa18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 ACSBG1Q96GR2 724 aa18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 NOC4LQ9BVI4 516 aaKnown RBP18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 TXNDC16Q9P2K2 825 aa18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 HPDP32754 393 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 ATL3Q6DD88 541 aa18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 AFAP1L1Q8TED9 768 aa18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 NAP1L3Q99457 506 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPG-201ENST00000342711 NAPGQ99747 312 aaPredicted RBP18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 VPS16Q9H269 839 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 RBM28Q9NW13 759 aaKnown RBP18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 SOS1Q07889 1333 aaPredicted RBP18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 STIM2Q9P246 746 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 SV2BQ7L1I2 683 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 CCDC26Q8TAB7 109 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 RASSF4Q9H2L5 321 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 RPS6KB1P23443 525 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 ZRANB1Q9UGI0 708 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 UGGT2Q9NYU1 1516 aa18.55■□□□□ 0.56
CDC42BPG-201ENST00000342711 VIMP08670 466 aaKnown RBP18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 TRIM7Q9C029 511 aa18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 HDAC9Q9UKV0 1011 aa18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 MSH6P52701 1360 aa18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 TRAF5O00463 557 aa18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 CFAP157Q5JU67 520 aa18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 FAM169AQ9Y6X4 670 aa18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 RIOK3O14730 519 aaKnown RBP18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 GBP6Q6ZN66 633 aa18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 RSRC1Q96IZ7 334 aaKnown RBP18.54■□□□□ 0.56
CDC42BPG-201ENST00000342711 ITSN2Q9NZM3 1697 aa18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 INTS8Q75QN2 995 aaKnown RBP18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 LEO1Q8WVC0 666 aaPredicted RBP18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 HELLSQ9NRZ9 838 aa18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 NKIRAS1Q9NYS0 192 aa18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 POLR3AO14802 1390 aaPredicted RBP18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 RNASE9P60153 205 aaKnown RBP18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 TBC1D8BQ0IIM8 1120 aa18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 LETM2Q2VYF4 491 aa18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 JAKMIP2Q96AA8 810 aa18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 RPL13P26373 211 aaKnown RBP18.53■□□□□ 0.56
CDC42BPG-201ENST00000342711 TPD52P55327 224 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms