RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 NARFQ9UHQ1 456 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 TTC41PQ6P2S7 1318 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 LRMPQ12912 555 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 CLEC4GQ6UXB4 293 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 SNX21Q969T3 373 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 ZNF831Q5JPB2 1677 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 WTIPA6NIX2 430 aaPredicted RBP12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 PDCP20941 246 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 TBC1D9BQ66K14 1250 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 TRIM34Q9BYJ4 488 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 NYXQ9GZU5 481 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 A0A1B0GUL7 405 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 AKAP17AQ02040 695 aaKnown RBP12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 ERFEQ4G0M1 354 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 DDX46Q7L014 1031 aaKnown RBP12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 DYNC1I1O14576 645 aa12.17□□□□□ -0.46
CAPRIN1-201ENST00000341394 CSF1RP07333 972 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 IFIT1P09914 478 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 ATP2B3Q16720 1220 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 GTF3C6Q969F1 213 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 CDC5LQ99459 802 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 RIC1Q4ADV7 1423 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 SYT1P21579 422 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 ADORA1P30542 326 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 SLC4A8Q2Y0W8 1093 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 TMC6Q7Z403 805 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 NUP133Q8WUM0 1156 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 VPS37DQ86XT2 251 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 FBXO41Q8TF61 875 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 UBXN4Q92575 508 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 EVI5LQ96CN4 794 aa12.16□□□□□ -0.46
CAPRIN1-201ENST00000341394 ZSCAN22P10073 491 aaPredicted RBP12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 BRF1Q92994 677 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 ANKRD18AQ8IVF6 992 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 ARGLU1Q9NWB6 273 aaPredicted RBP12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 CDHR2Q9BYE9 1310 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 LAMB2P55268 1798 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 SCN7AQ01118 1682 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 GOLIM4O00461 696 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 TAF5LO75529 589 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 LETM1O95202 739 aaPredicted RBP12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 PI16Q6UXB8 463 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 GPIHBP1Q8IV16 184 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 AOX1Q06278 1338 aa12.15□□□□□ -0.46
CAPRIN1-201ENST00000341394 NTSR2O95665 410 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 CPLX2Q6PUV4 134 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 FSIP1Q8NA03 581 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 SLC27A3Q5K4L6 730 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 NOL7Q9UMY1 257 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 ZNF609O15014 1411 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 SCARF1Q14162 830 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 OTUD7BQ6GQQ9 843 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 AKAP11Q9UKA4 1901 aa12.14□□□□□ -0.47
CAPRIN1-201ENST00000341394 FSD2A1L4K1 749 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 DHX16O60231 1041 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 PHACTR2O75167 634 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 LIG1P18858 919 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 OLFM4Q6UX06 510 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 PLA2G12BQ9BX93 195 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 A0A0D9SFI3 127 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 MARCH6O60337 910 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 SKILP12757 684 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 RXRAP19793 462 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 TSR1Q2NL82 804 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 UBR3Q6ZT12 1888 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 UBE2HP62256 183 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 PTH1RQ03431 593 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 HSP90B2PQ58FF3 399 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 XAGE2Q96GT9 111 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 SEC62Q99442 399 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 TAF6LQ9Y6J9 622 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 HIP1O00291 1037 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 SFPQP23246 707 aaKnown RBP eCLIP12.13□□□□□ -0.475e-6■□□□□ 11.2
CAPRIN1-201ENST00000341394 DHX8Q14562 1220 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 PROM2Q8N271 834 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 CENPHQ9H3R5 247 aa12.13□□□□□ -0.47
CAPRIN1-201ENST00000341394 CIAO1O76071 339 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 NAA30Q147X3 362 aaPredicted RBP12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 FKBP15Q5T1M5 1219 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 ZNF589Q86UQ0 364 aaPredicted RBP12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 RPGRQ92834 1020 aaKnown RBP12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 SLC5A1P13866 664 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 GPS2Q13227 327 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms