RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 CCNJLQ8IV13 435 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 TGIF2Q9GZN2 237 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 CHMP4BQ9H444 224 aaKnown RBP3.13□□□□□ -1.91
CCDC30-201ENST00000340612 SRA1Q9HD15 236 aaKnown RBP3.13□□□□□ -1.91
CCDC30-201ENST00000340612 C11orf16Q9NQ32 467 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 NAGPAQ9UK23 515 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 SYNJ2O15056 1496 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 LOC102724428A0A0B4J2F2 783 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 GIPC1O14908 333 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 MAP3K6O95382 1288 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 DNAJA1P31689 397 aaKnown RBP3.13□□□□□ -1.91
CCDC30-201ENST00000340612 SOX18P35713 384 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 SIK1P57059 783 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 SREK1Q8WXA9 508 aaKnown RBP3.13□□□□□ -1.91
CCDC30-201ENST00000340612 SPACA7Q96KW9 195 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 DDX41Q9UJV9 622 aaKnown RBP3.13□□□□□ -1.91
CCDC30-201ENST00000340612 TLR6Q9Y2C9 796 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 TAL1P17542 331 aaPredicted RBP3.12□□□□□ -1.91
CCDC30-201ENST00000340612 CDC25BP30305 580 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 NRLP54845 237 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 GPLD1P80108 840 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 FAAP100Q0VG06 881 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 CEP135Q66GS9 1140 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 FAM35AQ86V20 835 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 CNPY4Q8N129 248 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 TRPM4Q8TD43 1214 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 SRCIN1Q9C0H9 1055 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 LACRTQ9GZZ8 138 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 MUC3BQ9H195 1237 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 PRDM10Q9NQV6 1147 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 TRAK1Q9UPV9 953 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 INPP5FQ9Y2H2 1132 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 RNF114Q9Y508 228 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 PDE2AO00408 941 aaPredicted RBP3.12□□□□□ -1.91
CCDC30-201ENST00000340612 PAGE1O75459 146 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 HMGB1P09429 215 aaKnown RBP3.12□□□□□ -1.91
CCDC30-201ENST00000340612 ITGAEP38570 1179 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 FAM160A1Q05DH4 1040 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 PRRT3Q5FWE3 981 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 PERM1Q5SV97 790 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 FAM182BQ5T319 152 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 ZNF468Q5VIY5 522 aaPredicted RBP3.12□□□□□ -1.91
CCDC30-201ENST00000340612 PRPF40BQ6NWY9 871 aaKnown RBP3.12□□□□□ -1.91
CCDC30-201ENST00000340612 ERMP1Q7Z2K6 904 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 DHX38Q92620 1227 aaKnown RBP3.12□□□□□ -1.91
CCDC30-201ENST00000340612 NXPE3Q969Y0 559 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 POP1Q99575 1024 aaKnown RBP3.12□□□□□ -1.91
CCDC30-201ENST00000340612 PBX4Q9BYU1 374 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 TANGO6Q9C0B7 1094 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 TRIM33Q9UPN9 1127 aa3.12□□□□□ -1.91
CCDC30-201ENST00000340612 BICRAQ9NZM4 1560 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 A0A096LPE4 126 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 A0A1W2PPZ6 126 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 GHRHP01286 108 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 ST13P50502 369 aaKnown RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 JAG1P78504 1218 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 PTPN12Q05209 780 aaKnown RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 PAK2Q13177 524 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 COL9A3Q14050 684 aaPredicted RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 TMED8Q6PL24 325 aaPredicted RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 TEX2Q8IWB9 1127 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 IPO4Q8TEX9 1081 aaKnown RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 SECISBP2LQ93073 1101 aaKnown RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 PLD4Q96BZ4 506 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 DRC1Q96MC2 740 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 PUS7Q96PZ0 661 aaKnown RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 DNAJC2Q99543 621 aaKnown RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 GPN3Q9UHW5 284 aaPredicted RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 SLC6A14Q9UN76 642 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 ENC1O14682 589 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 HOXD8P13378 290 aaPredicted RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 GBP2P32456 591 aaPredicted RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 ADH7P40394 386 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 RASIP1Q5U651 963 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 C8orf86Q6ZUL3 223 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 ZNF654Q8IZM8 581 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 NUDT8Q8WV74 236 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 SMG9Q9H0W8 520 aaKnown RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 SH2B1Q9NRF2 756 aaPredicted RBP3.11□□□□□ -1.91
CCDC30-201ENST00000340612 PPP4R2Q9NY27 417 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 PRKAG2Q9UGJ0 569 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 ADAMTS1Q9UHI8 967 aa3.11□□□□□ -1.91
CCDC30-201ENST00000340612 ADH6P28332 368 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 HGSNATQ68CP4 663 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 GDF6Q6KF10 455 aaPredicted RBP3.1□□□□□ -1.91
CCDC30-201ENST00000340612 TICAM2Q86XR7 235 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 TMEM102Q8N9M5 508 aaPredicted RBP3.1□□□□□ -1.91
CCDC30-201ENST00000340612 LPIN3Q9BQK8 851 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 BHLHE41Q9C0J9 482 aaPredicted RBP3.1□□□□□ -1.91
CCDC30-201ENST00000340612 ZNF576Q9H609 170 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 SIN3BO75182 1162 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 NCLP19338 710 aaKnown RBP3.1□□□□□ -1.91
CCDC30-201ENST00000340612 ITPKAP23677 461 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 GTF2F1P35269 517 aaKnown RBP eCLIP3.1□□□□□ -1.91
CCDC30-201ENST00000340612 IRAK1P51617 712 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 MBTPS1Q14703 1052 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 PSAPL1Q6NUJ1 521 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 ELMSAN1Q6PJG2 1045 aa3.1□□□□□ -1.91
CCDC30-201ENST00000340612 TXNDC11Q6PKC3 985 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms