RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 NEK1Q96PY6 1258 aa20.46■□□□□ 0.87
SLC3A2-201ENST00000338663 LRRC37AA6NMS7 1700 aa20.46■□□□□ 0.87
SLC3A2-201ENST00000338663 QSER1Q2KHR3 1735 aa20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 MAST2Q6P0Q8 1798 aa20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 SYCE3A1L190 88 aa20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 COL9A3Q14050 684 aaPredicted RBP20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 FAM84BQ96KN1 310 aaPredicted RBP20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 TSPY26PQ9H489 355 aa20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 VPS37DQ86XT2 251 aa20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 ZSCAN31Q96LW9 406 aaPredicted RBP20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 RBM27Q9P2N5 1060 aaKnown RBP20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 CTNNA3Q9UI47 895 aa20.45■□□□□ 0.86
SLC3A2-201ENST00000338663 UQCRHLA0A096LP55 91 aa20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 SEMA3EO15041 775 aa20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 UQCRHP07919 91 aa20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 ANKRD1Q15327 319 aa20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 STOX1Q6ZVD7 989 aa20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 NLGN1Q8N2Q7 840 aa20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 MAGEB6Q8N7X4 407 aa20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 SH2B1Q9NRF2 756 aaPredicted RBP20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 CACNA1SQ13698 1873 aa20.44■□□□□ 0.86
SLC3A2-201ENST00000338663 FBXO33Q7Z6M2 555 aa20.43■□□□□ 0.86
SLC3A2-201ENST00000338663 DENND2AQ9ULE3 1009 aa20.43■□□□□ 0.86
SLC3A2-201ENST00000338663 IQSEC3Q9UPP2 1182 aaPredicted RBP20.43■□□□□ 0.86
SLC3A2-201ENST00000338663 PDS5AQ29RF7 1337 aaKnown RBP20.43■□□□□ 0.86
SLC3A2-201ENST00000338663 IRS2Q9Y4H2 1338 aa20.43■□□□□ 0.86
SLC3A2-201ENST00000338663 HMGB1P09429 215 aaKnown RBP20.43■□□□□ 0.86
SLC3A2-201ENST00000338663 KLRK1P26718 216 aa20.43■□□□□ 0.86
SLC3A2-201ENST00000338663 LARP6Q9BRS8 491 aaKnown RBP20.43■□□□□ 0.86
SLC3A2-201ENST00000338663 PNPLA7Q6ZV29 1317 aa20.42■□□□□ 0.86
SLC3A2-201ENST00000338663 LARGE1O95461 756 aa20.42■□□□□ 0.86
SLC3A2-201ENST00000338663 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
SLC3A2-201ENST00000338663 CHD4Q14839 1912 aa20.42■□□□□ 0.86
SLC3A2-201ENST00000338663 XDHP47989 1333 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 A0A0G2JLW4 131 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 LETM1O95202 739 aaPredicted RBP20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 FGAP02671 866 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 KIAA2012Q0VF49 1180 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 IMMTQ16891 758 aaKnown RBP20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 TTLL5Q6EMB2 1281 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 TCEANC2Q96MN5 208 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 LRP2BPQ9P2M1 347 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 CCDC88AQ3V6T2 1871 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 LTBP1Q14766 1721 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 WDR33Q9C0J8 1336 aaKnown RBP20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 E7EWF7 191 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 ZBTB22O15209 634 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 HOXA10P31260 410 aaPredicted RBP20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 TOB2Q14106 344 aaPredicted RBP20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 TMEM87AQ8NBN3 555 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 AIDAQ96BJ3 306 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 LEMD3Q9Y2U8 911 aa20.41■□□□□ 0.86
SLC3A2-201ENST00000338663 KIAA1551Q9HCM1 1747 aa20.4■□□□□ 0.86
SLC3A2-201ENST00000338663 HIBADHP31937 336 aaKnown RBP20.4■□□□□ 0.86
SLC3A2-201ENST00000338663 TPCN1Q9ULQ1 816 aa20.4■□□□□ 0.86
SLC3A2-201ENST00000338663 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.4■□□□□ 0.86
SLC3A2-201ENST00000338663 ME3Q16798 604 aa20.39■□□□□ 0.86
SLC3A2-201ENST00000338663 STRBPQ96SI9 672 aaKnown RBP20.39■□□□□ 0.86
SLC3A2-201ENST00000338663 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.86
SLC3A2-201ENST00000338663 ZMYM6O95789 1325 aa20.39■□□□□ 0.85
SLC3A2-201ENST00000338663 MBD4O95243 580 aa20.38■□□□□ 0.85
SLC3A2-201ENST00000338663 DHX32Q7L7V1 743 aaKnown RBP20.38■□□□□ 0.85
SLC3A2-201ENST00000338663 SLC51AQ86UW1 340 aa20.38■□□□□ 0.85
SLC3A2-201ENST00000338663 TIAM2Q8IVF5 1701 aa20.38■□□□□ 0.85
SLC3A2-201ENST00000338663 CRAMP1Q96RY5 1269 aa20.38■□□□□ 0.85
SLC3A2-201ENST00000338663 ABCF2Q9UG63 623 aa20.38■□□□□ 0.85
SLC3A2-201ENST00000338663 CCDC83Q8IWF9 413 aa20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 PRIMPOLQ96LW4 560 aa20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 BBOX1O75936 387 aa20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 HAND2P61296 217 aa20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 HMGN5P82970 282 aaKnown RBP20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 ST3GAL1Q11201 340 aa20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 Q6ZUG5 572 aa20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 TXNRD3Q86VQ6 643 aa20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 NSFL1CQ9UNZ2 370 aaKnown RBP20.37■□□□□ 0.85
SLC3A2-201ENST00000338663 ZNF213O14771 459 aa20.36■□□□□ 0.85
SLC3A2-201ENST00000338663 PTMAP06454 111 aaKnown RBP20.36■□□□□ 0.85
SLC3A2-201ENST00000338663 ALX1Q15699 326 aa20.36■□□□□ 0.85
SLC3A2-201ENST00000338663 CAMKK2Q96RR4 588 aa20.36■□□□□ 0.85
SLC3A2-201ENST00000338663 RAI14Q9P0K7 980 aa20.36■□□□□ 0.85
SLC3A2-201ENST00000338663 DUOX1Q9NRD9 1551 aa20.36■□□□□ 0.85
SLC3A2-201ENST00000338663 MMP10P09238 476 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 GPSM2P81274 684 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 EXOSC10Q01780 885 aaKnown RBP20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 C15orf52Q6ZUT6 534 aaKnown RBP20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 ARMT1Q9H993 441 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 FAM13BQ9NYF5 915 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 APPP05067 770 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 GNAT2P19087 354 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 CYP7A1P22680 504 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 EZH2Q15910 746 aaKnown RBP20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 TMC4Q7Z404 712 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 LCORLQ8N3X6 602 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 AGXT2Q9BYV1 514 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 SMC3Q9UQE7 1217 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 PARP3Q9Y6F1 533 aa20.35■□□□□ 0.85
SLC3A2-201ENST00000338663 PATL2C9JE40 543 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms