RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 LDHBP07195 334 aaKnown RBP13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 NF2P35240 595 aa13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 CRKP46108 304 aa13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 DEFB115Q30KQ5 88 aa13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 CST9Q5W186 159 aa13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 AIDAQ96BJ3 306 aa13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 ZBED3Q96IU2 234 aaPredicted RBP13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 EXOC6BQ9Y2D4 811 aa13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 ZNF646O15015 1829 aaPredicted RBP13.9□□□□□ -0.18
SLC28A1-202ENST00000338602 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.18
SLC28A1-202ENST00000338602 TNFAIP1Q13829 316 aa13.9□□□□□ -0.18
SLC28A1-202ENST00000338602 TTC39AQ5SRH9 613 aa13.9□□□□□ -0.18
SLC28A1-202ENST00000338602 SLF2Q8IX21 1173 aa13.9□□□□□ -0.18
SLC28A1-202ENST00000338602 KIF1BPQ96EK5 621 aa13.9□□□□□ -0.18
SLC28A1-202ENST00000338602 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
SLC28A1-202ENST00000338602 PRMT6Q96LA8 375 aaPredicted RBP13.9□□□□□ -0.18
SLC28A1-202ENST00000338602 RASSF10A6NK89 507 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 ECE1P42892 770 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 RASGRF1Q13972 1273 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 PAXIP1Q6ZW49 1069 aaPredicted RBP13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 CLASRPQ8N2M8 674 aaKnown RBP13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 VEZTQ9HBM0 779 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 GBA2Q9HCG7 927 aaPredicted RBP13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 ABCF2Q9UG63 623 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 PPP2R3BQ9Y5P8 575 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
SLC28A1-202ENST00000338602 TRPM7Q96QT4 1865 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 CLRN2A0PK11 232 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 ARID4AP29374 1257 aaPredicted RBP13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 TNNI2P48788 182 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 RGS19P49795 217 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 FKBP1BP68106 108 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 HHIPL2Q6UWX4 724 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 SIRT2Q8IXJ6 389 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 SPATA5Q8NB90 893 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 HHIPL1Q96JK4 782 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 ZDHHC15Q96MV8 337 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 DBNDD2Q9BQY9 259 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 ARAP2Q8WZ64 1704 aa13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 POLR2AP24928 1970 aaKnown RBP13.88□□□□□ -0.19
SLC28A1-202ENST00000338602 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 MYH13Q9UKX3 1938 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 APBB1O00213 710 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 HUNKP57058 714 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 AAMPQ13685 434 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 GRIK5Q16478 980 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 SUPT20HL1Q3ZLR7 823 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 SAPCD2Q86UD0 394 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 AACSQ86V21 672 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 ZNF512BQ96KM6 892 aaPredicted RBP13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 CCDC8Q9H0W5 538 aaPredicted RBP13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 DEFB129Q9H1M3 183 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 TDRD3Q9H7E2 651 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 HMG20BQ9P0W2 317 aa13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 ZNF70Q9UC06 446 aaPredicted RBP13.87□□□□□ -0.19
SLC28A1-202ENST00000338602 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
SLC28A1-202ENST00000338602 PRDX5P30044 214 aa13.86□□□□□ -0.19
SLC28A1-202ENST00000338602 GSTO1P78417 241 aa13.86□□□□□ -0.19
SLC28A1-202ENST00000338602 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-202ENST00000338602 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
SLC28A1-202ENST00000338602 EAF2Q96CJ1 260 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-202ENST00000338602 PCDHAC2Q9Y5I4 1007 aa13.86□□□□□ -0.19
SLC28A1-202ENST00000338602 CCDC85CA6NKD9 419 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 LDHCP07864 332 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 VEGFBP49765 207 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 LBX1P52954 281 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 ARMC9Q7Z3E5 817 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 CRBNQ96SW2 442 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 IL1RAPL2Q9NP60 686 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 LRP2BPQ9P2M1 347 aa13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 DBNLQ9UJU6 430 aaKnown RBP13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 SCAF8Q9UPN6 1271 aaKnown RBP13.85□□□□□ -0.19
SLC28A1-202ENST00000338602 PPP1R12BO60237 982 aaPredicted RBP13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 IGSF3O75054 1194 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 MCAMP43121 646 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 GRM1Q13255 1194 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 RASA3Q14644 834 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 FKBP1CQ5VVH2 108 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 PRAMEF18Q5VWM3 479 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 CAPNS2Q96L46 248 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 LRRCC1Q9C099 1032 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 RAI14Q9P0K7 980 aa13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 WDR33Q9C0J8 1336 aaKnown RBP13.84□□□□□ -0.19
SLC28A1-202ENST00000338602 TCP10L2B9ZVM9 353 aa13.83□□□□□ -0.19
SLC28A1-202ENST00000338602 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.19
SLC28A1-202ENST00000338602 APOBEC3HQ6NTF7 200 aaKnown RBP13.83□□□□□ -0.19
SLC28A1-202ENST00000338602 RGMBQ6NW40 437 aa13.83□□□□□ -0.19
SLC28A1-202ENST00000338602 CCDC102AQ96A19 550 aa13.83□□□□□ -0.19
SLC28A1-202ENST00000338602 HOOK2Q96ED9 719 aa13.83□□□□□ -0.19
SLC28A1-202ENST00000338602 BCL11AQ9H165 835 aa13.83□□□□□ -0.19
SLC28A1-202ENST00000338602 DAGLAQ9Y4D2 1042 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms