RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 MINDY4BA8MYZ0 360 aa11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 GADD45BO75293 160 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 F13A1P00488 732 aa11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 HMGB1P09429 215 aaKnown RBP11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 HIBADHP31937 336 aaKnown RBP11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 DDR1Q08345 913 aa11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 TRDNQ13061 729 aa11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 IFNL3Q8IZI9 196 aa11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 EPB41L4AQ9HCS5 686 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-202ENST00000338458 SCN7AQ01118 1682 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 LRP5O75197 1615 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 EXOSC10Q01780 885 aaKnown RBP11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 GUCY1B3Q02153 619 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 DNM1Q05193 864 aaKnown RBP11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 ZNF772Q68DY9 489 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 CCDC144CPQ8IYA2 1237 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 NCOA7Q8NI08 942 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 GPT2Q8TD30 523 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 GTF3C6Q969F1 213 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 NBPF3Q9H094 633 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 MTMR6Q9Y217 621 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 TCHHQ07283 1943 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 ST5P78524 1137 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 SKOR2Q2VWA4 1001 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 CLEC17AQ6ZS10 378 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 FAM184AQ8NB25 1140 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 ZKSCAN3Q9BRR0 538 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 LY75O60449 1722 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 MYH7P12883 1935 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 GOLGA6L3A6NEY3 463 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 USP48Q86UV5 1035 aa11.92□□□□□ -0.5
ARHGEF3-202ENST00000338458 KLF18A0A0U1RQI7 1052 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 RXRBP28702 533 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 PRDX5P30044 214 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 CYP2D7A0A087X1C5 515 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 MCM5P33992 734 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 ANTXR2P58335 489 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 GRAPQ13588 217 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 ANKRD2Q9GZV1 360 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 GSG1L2A8MUP6 293 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 ADRA2BP18089 450 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 NAA16Q6N069 864 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 CYB5R4Q7L1T6 521 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 GAS2L3Q86XJ1 694 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 MYL10Q9BUA6 226 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 SENP2Q9HC62 589 aa11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 TFIP11Q9UBB9 837 aaKnown RBP11.91□□□□□ -0.5
ARHGEF3-202ENST00000338458 C4AP0C0L4 1744 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 NEDD4P46934 1319 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 MAGEB6P1A0A0J9YX57 407 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 H3BQV1 296 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 KLHL40Q2TBA0 621 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 OLFM4Q6UX06 510 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 COL23A1Q86Y22 540 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 ZNF831Q5JPB2 1677 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 LAMA4Q16363 1823 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 LAMB2P55268 1798 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 GOLGA8BA8MQT2 603 aa11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 AATFQ9NY61 560 aaKnown RBP eCLIP11.9□□□□□ -0.5
ARHGEF3-202ENST00000338458 CEBPZQ03701 1054 aaKnown RBP11.9□□□□□ -0.51
ARHGEF3-202ENST00000338458 MB21D2Q8IYB1 491 aaPredicted RBP11.9□□□□□ -0.51
ARHGEF3-202ENST00000338458 TNRC6CQ9HCJ0 1690 aaKnown RBP11.9□□□□□ -0.51
ARHGEF3-202ENST00000338458 PTPDC1A2A3K4 754 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 UFL1O94874 794 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 NFXL1Q6ZNB6 911 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 FBXO33Q7Z6M2 555 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 CASZ1Q86V15 1759 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 PRDM1O75626 825 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 PTMSP20962 102 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 GPSM2P81274 684 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 OTUD7BQ6GQQ9 843 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 ZNF384Q8TF68 577 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 PANK2Q9BZ23 570 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 TACC3Q9Y6A5 838 aa11.89□□□□□ -0.51
ARHGEF3-202ENST00000338458 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 PFKFB2O60825 505 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 CTDNEP1O95476 244 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 MECOMQ03112 1051 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 EVX2Q03828 476 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 NACAP1Q9BZK3 213 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 POLRMTO00411 1230 aaKnown RBP11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 MICU3Q86XE3 530 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 TICAM2Q86XR7 235 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 CHMP4CQ96CF2 233 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 GJB4Q9NTQ9 266 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 IL27Q8NEV9 243 aa11.88□□□□□ -0.51
ARHGEF3-202ENST00000338458 TMEM63CQ9P1W3 806 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms