RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 POLR3GO15318 223 aaPredicted RBP16.17■□□□□ 0.18
SF1-202ENST00000334944 SMIM5Q71RC9 77 aa16.17■□□□□ 0.18
SF1-202ENST00000334944 PIH1D3Q9NQM4 214 aaKnown RBP16.17■□□□□ 0.18
SF1-202ENST00000334944 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
SF1-202ENST00000334944 MAP3K11Q16584 847 aa16.17■□□□□ 0.18
SF1-202ENST00000334944 TEX13AQ9BXU3 409 aaPredicted RBP16.17■□□□□ 0.18
SF1-202ENST00000334944 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
SF1-202ENST00000334944 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
SF1-202ENST00000334944 HMGB1P09429 215 aaKnown RBP16.16■□□□□ 0.18
SF1-202ENST00000334944 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
SF1-202ENST00000334944 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
SF1-202ENST00000334944 SEC31BQ9NQW1 1179 aa16.16■□□□□ 0.18
SF1-202ENST00000334944 PRC1O43663 620 aa16.16■□□□□ 0.18
SF1-202ENST00000334944 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
SF1-202ENST00000334944 ZNF397Q8NF99 534 aaPredicted RBP16.16■□□□□ 0.18
SF1-202ENST00000334944 NOL10Q9BSC4 688 aaKnown RBP16.16■□□□□ 0.18
SF1-202ENST00000334944 TRIM5Q9C035 493 aa16.16■□□□□ 0.18
SF1-202ENST00000334944 RIC1Q4ADV7 1423 aa16.16■□□□□ 0.18
SF1-202ENST00000334944 TYRO3Q06418 890 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
SF1-202ENST00000334944 CEP135Q66GS9 1140 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 CCDC144CPQ8IYA2 1237 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 RGS22Q8NE09 1264 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 ZNF446Q9NWS9 450 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 IQSEC3Q9UPP2 1182 aaPredicted RBP16.15■□□□□ 0.18
SF1-202ENST00000334944 PLEKHG2Q9H7P9 1386 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 POLR3DP05423 398 aaPredicted RBP16.15■□□□□ 0.18
SF1-202ENST00000334944 ANO6Q4KMQ2 910 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 SMARCC2Q8TAQ2 1214 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 CACTINQ8WUQ7 758 aaKnown RBP16.15■□□□□ 0.18
SF1-202ENST00000334944 RSPH14Q9UHP6 348 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 WWC3Q9ULE0 1092 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 GYS2P54840 703 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 APPBP2Q92624 585 aa16.15■□□□□ 0.18
SF1-202ENST00000334944 LAMA4Q16363 1823 aa16.14■□□□□ 0.17
SF1-202ENST00000334944 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
SF1-202ENST00000334944 FDPSP14324 419 aaKnown RBP16.14■□□□□ 0.17
SF1-202ENST00000334944 ZSCAN25Q6NSZ9 544 aa16.14■□□□□ 0.17
SF1-202ENST00000334944 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
SF1-202ENST00000334944 CCDC102BQ68D86 513 aa16.14■□□□□ 0.17
SF1-202ENST00000334944 SENP2Q9HC62 589 aa16.14■□□□□ 0.17
SF1-202ENST00000334944 ELP1O95163 1332 aa16.14■□□□□ 0.17
SF1-202ENST00000334944 BCL9O00512 1426 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 ZNF213O14771 459 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 TRIM66O15016 1216 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 ANTXR2P58335 489 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 PAPPAQ13219 1627 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 WTIPA6NIX2 430 aaPredicted RBP16.13■□□□□ 0.17
SF1-202ENST00000334944 ADD1P35611 737 aaKnown RBP16.13■□□□□ 0.17
SF1-202ENST00000334944 SLC20A2Q08357 652 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 RALYLQ86SE5 291 aaKnown RBP16.13■□□□□ 0.17
SF1-202ENST00000334944 AIFM3Q96NN9 605 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 DNAJC25Q9H1X3 360 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 ZNF532Q9HCE3 1301 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 PDE8BO95263 885 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
SF1-202ENST00000334944 C10orf67Q8IYJ2 551 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 LRRN4CLQ8ND94 238 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 PLA2G12BQ9BX93 195 aa16.13■□□□□ 0.17
SF1-202ENST00000334944 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
SF1-202ENST00000334944 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
SF1-202ENST00000334944 NBPF3Q9H094 633 aa16.12■□□□□ 0.17
SF1-202ENST00000334944 GOLPH3LQ9H4A5 285 aa16.12■□□□□ 0.17
SF1-202ENST00000334944 ME1P48163 572 aa16.12■□□□□ 0.17
SF1-202ENST00000334944 VGLL2Q8N8G2 317 aa16.12■□□□□ 0.17
SF1-202ENST00000334944 PDE8AO60658 829 aa16.11■□□□□ 0.17
SF1-202ENST00000334944 CARMIL3Q8ND23 1372 aa16.11■□□□□ 0.17
SF1-202ENST00000334944 UBE2Q2LH0YL09 131 aa16.11■□□□□ 0.17
SF1-202ENST00000334944 TPM3P06753 285 aa16.11■□□□□ 0.17
SF1-202ENST00000334944 CYP2C19P33261 490 aa16.11■□□□□ 0.17
SF1-202ENST00000334944 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
SF1-202ENST00000334944 AGXT2Q9BYV1 514 aa16.11■□□□□ 0.17
SF1-202ENST00000334944 CBX8Q9HC52 389 aa16.11■□□□□ 0.17
SF1-202ENST00000334944 B4E1Z4 1266 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 ERCC6LQ2NKX8 1250 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 LLPHQ9BRT6 129 aaKnown RBP16.1■□□□□ 0.17
SF1-202ENST00000334944 HPS5Q9UPZ3 1129 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 ITGB4P16144 1822 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 CPLX1O14810 134 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 KCNQ2O43526 872 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 ZFYP08048 801 aaPredicted RBP16.1■□□□□ 0.17
SF1-202ENST00000334944 ADD2P35612 726 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 MB21D2Q8IYB1 491 aaPredicted RBP16.1■□□□□ 0.17
SF1-202ENST00000334944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.1■□□□□ 0.17
SF1-202ENST00000334944 CLSTN2Q9H4D0 955 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
SF1-202ENST00000334944 LCMT1Q9UIC8 334 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 CFAP45Q9UL16 551 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 PAXBP1Q9Y5B6 917 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 PDE6AP16499 860 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
SF1-202ENST00000334944 SYCP1Q15431 976 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 CYB5R4Q7L1T6 521 aa16.1■□□□□ 0.17
SF1-202ENST00000334944 NCOA7Q8NI08 942 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms