RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 GOLGA1Q92805 767 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 XAGE2Q96GT9 111 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 DNAI2Q9GZS0 605 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 DEXIO95424 95 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 B4E1Z4 1266 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 ITGA6P23229 1130 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 PRPF4BQ13523 1007 aaKnown RBP19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 ZNF496Q96IT1 587 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 CCDC42Q96M95 316 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 GOPCQ9HD26 462 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 ORAI2Q96SN7 254 aa19.38■□□□□ 0.69
TRAPPC11-201ENST00000334690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.38■□□□□ 0.69
TRAPPC11-201ENST00000334690 STX17P56962 302 aa19.38■□□□□ 0.69
TRAPPC11-201ENST00000334690 RRP36Q96EU6 259 aaKnown RBP19.38■□□□□ 0.69
TRAPPC11-201ENST00000334690 DENND2AQ9ULE3 1009 aa19.38■□□□□ 0.69
TRAPPC11-201ENST00000334690 IL17REQ8NFR9 667 aa19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 MMRN2Q9H8L6 949 aa19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 LUC7L2Q9Y383 392 aaKnown RBP19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 SMC1AQ14683 1233 aaKnown RBP19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 PLVAPQ9BX97 442 aa19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 NCOA5Q9HCD5 579 aaKnown RBP19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 RRAGDQ9NQL2 400 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 MACROD2A1Z1Q3 448 aa19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 FBXO3Q9UK99 471 aa19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 MCM6Q14566 821 aa19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 CTNNBL1Q8WYA6 563 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 BCCIPQ9P287 314 aaKnown RBP eCLIP19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 SYNMO15061 1565 aa19.37■□□□□ 0.69
TRAPPC11-201ENST00000334690 PDE8AO60658 829 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 GIGYF1O75420 1035 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 LIG1P18858 919 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 PPP1R2P41236 205 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 PPP2R5BQ15173 497 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 TMEM63CQ9P1W3 806 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 KCNH3Q9ULD8 1083 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 SAMM50Q9Y512 469 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 SYT10Q6XYQ8 523 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 LDHBP07195 334 aaKnown RBP19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 DSCC1Q9BVC3 393 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 CFAP65Q6ZU64 1925 aaKnown RBP19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 KDM6BO15054 1643 aa19.36■□□□□ 0.69
TRAPPC11-201ENST00000334690 MCM7P33993 719 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 USP37Q86T82 979 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 HOOK3Q86VS8 718 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 MYOM2P54296 1465 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 GOLGA6L10A0A0M3HER8 536 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 CUTAO60888 179 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 CCDC174Q6PII3 467 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 MAATS1Q7Z4T9 603 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 V9GYY5 206 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 TBC1D5Q92609 795 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 BAG1Q99933 345 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 A1BGP04217 495 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 UBXN1Q04323 297 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 CCDC91Q7Z6B0 441 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 ZC3H12CQ9C0D7 883 aaKnown RBP19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 CBX8Q9HC52 389 aa19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 NSFL1CQ9UNZ2 370 aaKnown RBP19.35■□□□□ 0.69
TRAPPC11-201ENST00000334690 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 HSF2BPO75031 334 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 GADD45BO75293 160 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 TERF1P54274 439 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 DIS3L2Q8IYB7 885 aaKnown RBP19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 NEURL1BA8MQ27 555 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 KIAA0753Q2KHM9 967 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 SELENOOQ9BVL4 669 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 IBTKQ9P2D0 1353 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 ZNF622Q969S3 477 aaKnown RBP eCLIP19.34■□□□□ 0.697e-6■■□□□ 12.8
TRAPPC11-201ENST00000334690 ZNF75DP51815 510 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 CDC37L1Q7L3B6 337 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 LPIN2Q92539 896 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 ZKSCAN3Q9BRR0 538 aa19.34■□□□□ 0.69
TRAPPC11-201ENST00000334690 AKR1B15C9JRZ8 316 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC11-201ENST00000334690 MLKLQ8NB16 471 aa19.33■□□□□ 0.69
TRAPPC11-201ENST00000334690 ZNF594Q96JF6 807 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC11-201ENST00000334690 CDCA7Q9BWT1 371 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC11-201ENST00000334690 ABCA8O94911 1581 aa19.33■□□□□ 0.69
TRAPPC11-201ENST00000334690 VWA3AA6NCI4 1184 aa19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 ERO1AQ96HE7 468 aa19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 OSBPL3Q9H4L5 887 aa19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 LZTFL1Q9NQ48 299 aa19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 STAP2Q9UGK3 403 aa19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 TTC37Q6PGP7 1564 aa19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 CALRP27797 417 aaKnown RBP19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 TNNI2P48788 182 aa19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 CCDC94Q9BW85 323 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC11-201ENST00000334690 KRT13P13646 458 aa19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 PRPHP41219 470 aa19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 PLCD1P51178 756 aa19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 IMPACTQ9P2X3 320 aa19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 KARSQ15046 597 aaKnown RBP19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 EAF2Q96CJ1 260 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 CTNNA2P26232 953 aa19.32■□□□□ 0.68
TRAPPC11-201ENST00000334690 ME3Q16798 604 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms