RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 CCT5P48643 541 aa13.61□□□□□ -0.23
LIMK2-202ENST00000333611 NAIF1Q69YI7 327 aaPredicted RBP13.61□□□□□ -0.23
LIMK2-202ENST00000333611 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
LIMK2-202ENST00000333611 CCDC12Q8WUD4 166 aaPredicted RBP13.61□□□□□ -0.23
LIMK2-202ENST00000333611 EXOC4Q96A65 974 aa13.61□□□□□ -0.23
LIMK2-202ENST00000333611 ADAMTS13Q76LX8 1427 aa13.61□□□□□ -0.23
LIMK2-202ENST00000333611 MON2Q7Z3U7 1717 aa13.61□□□□□ -0.23
LIMK2-202ENST00000333611 SERPINC1P01008 464 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 USP8P40818 1118 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 NYAP1Q6ZVC0 841 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 EGFL6Q8IUX8 553 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 ACBD3Q9H3P7 528 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 HMG20BQ9P0W2 317 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 PTPRUQ92729 1446 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 CPLX1O14810 134 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 TADA2BQ86TJ2 420 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 ANO10Q9NW15 660 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 AKAP17AQ02040 695 aaKnown RBP13.6□□□□□ -0.23
LIMK2-202ENST00000333611 CFAP100Q494V2 611 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 FKBP15Q5T1M5 1219 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 RNF187Q5TA31 235 aaPredicted RBP13.6□□□□□ -0.23
LIMK2-202ENST00000333611 REXO1L1PQ8IX06 675 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
LIMK2-202ENST00000333611 CALRP27797 417 aaKnown RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 MCMDC2Q4G0Z9 681 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 LMBR1LQ6UX01 489 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 N4BP2L2Q92802 583 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 SMARCC1Q92922 1105 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 ZNF396Q96N95 335 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 ETF1P62495 437 aaKnown RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 RXRAP19793 462 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 CCZ1BP86790 482 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 CCZ1P86791 482 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 RAPGEF4Q8WZA2 1011 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
LIMK2-202ENST00000333611 SAMM50Q9Y512 469 aa13.59□□□□□ -0.23
LIMK2-202ENST00000333611 NEURL1BA8MQ27 555 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 ATP2C2O75185 946 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 SKAP2O75563 359 aaPredicted RBP13.58□□□□□ -0.24
LIMK2-202ENST00000333611 MTX1Q13505 466 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 GCKRQ14397 625 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 NAA25Q14CX7 972 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 E4F1Q66K89 784 aaPredicted RBP13.58□□□□□ -0.24
LIMK2-202ENST00000333611 ZNF594Q96JF6 807 aaPredicted RBP13.58□□□□□ -0.24
LIMK2-202ENST00000333611 ZSCAN16Q9H4T2 348 aaPredicted RBP13.58□□□□□ -0.24
LIMK2-202ENST00000333611 BABAM1Q9NWV8 329 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 CAPN7Q9Y6W3 813 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 XPO4Q9C0E2 1151 aaKnown RBP13.58□□□□□ -0.24
LIMK2-202ENST00000333611 NAT10Q9H0A0 1025 aaKnown RBP13.58□□□□□ -0.24
LIMK2-202ENST00000333611 FAM204AQ9H8W3 233 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
LIMK2-202ENST00000333611 DPCR1Q3MIW9 517 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 ERBB3P21860 1342 aa13.58□□□□□ -0.24
LIMK2-202ENST00000333611 PLEKHG2Q9H7P9 1386 aa13.57□□□□□ -0.24
LIMK2-202ENST00000333611 NSUN7Q8NE18 718 aaKnown RBP13.57□□□□□ -0.24
LIMK2-202ENST00000333611 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
LIMK2-202ENST00000333611 KIAA0754O94854 1291 aa13.57□□□□□ -0.24
LIMK2-202ENST00000333611 GSDMDP57764 484 aa13.57□□□□□ -0.24
LIMK2-202ENST00000333611 IQCB1Q15051 598 aa13.57□□□□□ -0.24
LIMK2-202ENST00000333611 DHX32Q7L7V1 743 aaKnown RBP13.57□□□□□ -0.24
LIMK2-202ENST00000333611 SGSM3Q96HU1 749 aa13.57□□□□□ -0.24
LIMK2-202ENST00000333611 POLD4Q9HCU8 107 aa13.57□□□□□ -0.24
LIMK2-202ENST00000333611 TECPR2O15040 1411 aa13.57□□□□□ -0.24
LIMK2-202ENST00000333611 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.57□□□□□ -0.24
LIMK2-202ENST00000333611 HOXB7P09629 217 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 PAX7P23759 505 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 ACTN3Q08043 901 aaPredicted RBP13.56□□□□□ -0.24
LIMK2-202ENST00000333611 ORAI2Q96SN7 254 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 DESI2Q9BSY9 194 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 ATG3Q9NT62 314 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 NRXN3Q9Y4C0 1643 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 WDHD1O75717 1129 aaPredicted RBP13.56□□□□□ -0.24
LIMK2-202ENST00000333611 NDUFA8P51970 172 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 FAM160A1Q05DH4 1040 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 LRRFIP1Q32MZ4 808 aaKnown RBP13.56□□□□□ -0.24
LIMK2-202ENST00000333611 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
LIMK2-202ENST00000333611 C8orf76Q96K31 380 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.56□□□□□ -0.24
LIMK2-202ENST00000333611 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.56□□□□□ -0.24
LIMK2-202ENST00000333611 EBAG9O00559 213 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 ERLIN1O75477 346 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 GCP02774 474 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 RPSAP08865 295 aaKnown RBP13.56□□□□□ -0.24
LIMK2-202ENST00000333611 PIK3R5Q8WYR1 880 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 MRPS27Q92552 414 aaKnown RBP13.56□□□□□ -0.24
LIMK2-202ENST00000333611 GOLGA1Q92805 767 aa13.56□□□□□ -0.24
LIMK2-202ENST00000333611 GOLGA8BA8MQT2 603 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms