RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ADKP55263 362 aaKnown RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 GCKRQ14397 625 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 AKAP4Q5JQC9 854 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 WDR24Q96S15 920 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 LLPHQ9BRT6 129 aaKnown RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 EID1Q9Y6B2 187 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 TMEM2Q9UHN6 1383 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 KLF18A0A0U1RQI7 1052 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 HOXB7P09629 217 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 NLRP12P59046 1061 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 CLIC6Q96NY7 704 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 CCDC85AQ96PX6 553 aaPredicted RBP9.09□□□□□ -0.95
VMA21-201ENST00000330374 SMC1AQ14683 1233 aaKnown RBP9.09□□□□□ -0.95
VMA21-201ENST00000330374 PROSER2Q86WR7 435 aaPredicted RBP9.09□□□□□ -0.95
VMA21-201ENST00000330374 FANCLQ9NW38 375 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 A0A087WZG4 1122 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 KIF28PB7ZC32 967 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 CASQ1P31415 396 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
VMA21-201ENST00000330374 NCAPHQ15003 741 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 CCDC191Q8NCU4 936 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 IRX2Q9BZI1 471 aaPredicted RBP9.09□□□□□ -0.95
VMA21-201ENST00000330374 CEMIPQ8WUJ3 1361 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 TADA3O75528 432 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 HSPD1P10809 573 aaKnown RBP9.09□□□□□ -0.95
VMA21-201ENST00000330374 SYKP43405 635 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 MCM6Q14566 821 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 LMBR1LQ6UX01 489 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 DNAJC5Q9H3Z4 198 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 RTEL1Q9NZ71 1219 aa9.09□□□□□ -0.95
VMA21-201ENST00000330374 PUF60Q9UHX1 559 aaKnown RBP9.09□□□□□ -0.95
VMA21-201ENST00000330374 TNRQ92752 1358 aa9.09□□□□□ -0.96
VMA21-201ENST00000330374 FMN2Q9NZ56 1722 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 TRIM66O15016 1216 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 TECPR2O15040 1411 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 ATP2B1P20020 1258 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 MYSM1Q5VVJ2 828 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 CPLX3Q8WVH0 158 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 DDX21Q9NR30 783 aaKnown RBP eCLIP9.08□□□□□ -0.96
VMA21-201ENST00000330374 PAG1Q9NWQ8 432 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 TSPOAP1O95153 1857 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 MROH7-TTC4A0A0A0MT08 1334 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 WDHD1O75717 1129 aaPredicted RBP9.08□□□□□ -0.96
VMA21-201ENST00000330374 ZNF827Q17R98 1081 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 TRIM65Q6PJ69 517 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 ZNF594Q96JF6 807 aaPredicted RBP9.08□□□□□ -0.96
VMA21-201ENST00000330374 ADAMTS13Q76LX8 1427 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 PTPRUQ92729 1446 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 PATL2C9JE40 543 aaKnown RBP9.08□□□□□ -0.96
VMA21-201ENST00000330374 PPP2R3AQ06190 1150 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 PSME1Q06323 249 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 TRMT44Q8IYL2 757 aaKnown RBP9.08□□□□□ -0.96
VMA21-201ENST00000330374 KBTBD3Q8NAB2 608 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 KCNG4Q8TDN1 519 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 IP6K1Q92551 441 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 LZTFL1Q9NQ48 299 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 PPP2R2CQ9Y2T4 447 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 PARP3Q9Y6F1 533 aa9.08□□□□□ -0.96
VMA21-201ENST00000330374 ZRANB2O95218 330 aaKnown RBP eCLIP9.07□□□□□ -0.96
VMA21-201ENST00000330374 LRRFIP1Q32MZ4 808 aaKnown RBP9.07□□□□□ -0.96
VMA21-201ENST00000330374 BARGINQ6ZT62 677 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 TOGARAM2Q6ZUX3 1019 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 CCDC12Q8WUD4 166 aaPredicted RBP9.07□□□□□ -0.96
VMA21-201ENST00000330374 FOXN1O15353 648 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 TBC1D8O95759 1140 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 ANO1Q5XXA6 986 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 OLFM4Q6UX06 510 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 PSMD1Q99460 953 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 HAUS7Q99871 368 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 ARFGAP3Q9NP61 516 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 PHACTR2O75167 634 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 EXOSC10Q01780 885 aaKnown RBP9.07□□□□□ -0.96
VMA21-201ENST00000330374 CC2D1AQ6P1N0 951 aaPredicted RBP9.07□□□□□ -0.96
VMA21-201ENST00000330374 REXO1L1PQ8IX06 675 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 PROM2Q8N271 834 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 PARD6BQ9BYG5 372 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 FEZ2Q9UHY8 353 aaPredicted RBP9.07□□□□□ -0.96
VMA21-201ENST00000330374 LCMT1Q9UIC8 334 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 PRC1O43663 620 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 GPS2Q13227 327 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 ZSCAN26Q16670 478 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 WWC2Q6AWC2 1192 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 ANKRD13DQ6ZTN6 518 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 CREBRFQ8IUR6 639 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 DHX58Q96C10 678 aa9.07□□□□□ -0.96
VMA21-201ENST00000330374 VWA3AA6NCI4 1184 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 ANKRD65E5RJM6 399 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 M0R2C6 588 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 TFRCP02786 760 aaKnown RBP9.06□□□□□ -0.96
VMA21-201ENST00000330374 IFIT1P09914 478 aaKnown RBP9.06□□□□□ -0.96
VMA21-201ENST00000330374 KCNA6P17658 529 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 MYL5Q02045 173 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 MTF1Q14872 753 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 ZNF467Q7Z7K2 595 aaPredicted RBP9.06□□□□□ -0.96
VMA21-201ENST00000330374 NFATC2IPQ8NCF5 419 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 PHKBQ93100 1093 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 EFCAB8A8MWE9 144 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 ZSCAN12O43309 604 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 PDIA6Q15084 440 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 ESCO1Q5FWF5 840 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms