RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PHKA1P46020 1223 aa6.21□□□□□ -1.41
LRIT3-201ENST00000327908 DLGAP5Q15398 846 aa6.21□□□□□ -1.41
LRIT3-201ENST00000327908 DACT2Q5SW24 774 aa6.21□□□□□ -1.41
LRIT3-201ENST00000327908 ZNF277Q9NRM2 450 aaPredicted RBP6.21□□□□□ -1.41
LRIT3-201ENST00000327908 HMG20BQ9P0W2 317 aa6.21□□□□□ -1.41
LRIT3-201ENST00000327908 GAKO14976 1311 aa6.21□□□□□ -1.41
LRIT3-201ENST00000327908 DOCK2Q92608 1830 aa6.21□□□□□ -1.41
LRIT3-201ENST00000327908 IRX6P78412 446 aaPredicted RBP6.21□□□□□ -1.42
LRIT3-201ENST00000327908 RNF20Q5VTR2 975 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 ZDHHC15Q96MV8 337 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 DHX36Q9H2U1 1008 aaKnown RBP6.21□□□□□ -1.42
LRIT3-201ENST00000327908 ATP8A2Q9NTI2 1148 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 MROH7-TTC4A0A0A0MT08 1334 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 TRIM6-TRIM34B2RNG4 842 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 RIMBP2O15034 1052 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 HLA-DOAP06340 250 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 CHAF1AQ13111 956 aaPredicted RBP6.21□□□□□ -1.42
LRIT3-201ENST00000327908 DCAF15Q66K64 600 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 FAM83AQ86UY5 434 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 HELBQ8NG08 1087 aaPredicted RBP6.21□□□□□ -1.42
LRIT3-201ENST00000327908 KLHDC4Q8TBB5 520 aa6.21□□□□□ -1.42
LRIT3-201ENST00000327908 VEGFAP15692 232 aaPredicted RBP6.2□□□□□ -1.42
LRIT3-201ENST00000327908 GYG1P46976 350 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 TIMM10P62072 90 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 GTF2IP78347 998 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 RASGRF1Q13972 1273 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 ALX1Q15699 326 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 FBXW7Q969H0 707 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 BCAMP50895 628 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 FKBP1BP68106 108 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 KRT32Q14532 448 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 PI4K2BQ8TCG2 481 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 DNAJC2Q99543 621 aaKnown RBP6.2□□□□□ -1.42
LRIT3-201ENST00000327908 RNF41Q9H4P4 317 aaPredicted RBP6.2□□□□□ -1.42
LRIT3-201ENST00000327908 ZNF219Q9P2Y4 722 aaPredicted RBP6.2□□□□□ -1.42
LRIT3-201ENST00000327908 U3KPZ7 1027 aaPredicted RBP6.2□□□□□ -1.42
LRIT3-201ENST00000327908 MAGEB6P1A0A0J9YX57 407 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 APBB1O00213 710 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
LRIT3-201ENST00000327908 ADD2P35612 726 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 CXCL9Q07325 125 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 SUPT20HL1Q3ZLR7 823 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 B4GALNT3Q6L9W6 998 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 TTC6Q86TZ1 520 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 AIDAQ96BJ3 306 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 MTA3Q9BTC8 594 aa6.2□□□□□ -1.42
LRIT3-201ENST00000327908 MYH7P12883 1935 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 GPR75-ASB3A0A0A6YYF3 556 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 ADORA1P30542 326 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 MCAMP43121 646 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 MCMDC2Q4G0Z9 681 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 LDHDQ86WU2 507 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 GMLQ99445 158 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 TRIM34Q9BYJ4 488 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 SNRKQ9NRH2 765 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 GPRC5DQ9NZD1 345 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 ARPP21Q9UBL0 812 aaPredicted RBP6.19□□□□□ -1.42
LRIT3-201ENST00000327908 SWAP70Q9UH65 585 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 TTF2Q9UNY4 1162 aaKnown RBP6.19□□□□□ -1.42
LRIT3-201ENST00000327908 SBF1O95248 1867 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 GOLIM4O00461 696 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 PSMD14O00487 310 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 CYP7A1P22680 504 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 RASSF7Q02833 373 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 ZMYM1Q5SVZ6 1142 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 DSCC1Q9BVC3 393 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 BOLA2Q9H3K6 86 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 DBNDD1Q9H9R9 158 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 GTF3C3Q9Y5Q9 886 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 AK9Q5TCS8 1911 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 IDH1O75874 414 aaKnown RBP6.19□□□□□ -1.42
LRIT3-201ENST00000327908 PDE6AP16499 860 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 ZAP70P43403 619 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 CRKP46108 304 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 FSTL1Q12841 308 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 KIF4BQ2VIQ3 1234 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 REM2Q8IYK8 340 aaPredicted RBP6.19□□□□□ -1.42
LRIT3-201ENST00000327908 DCPSQ96C86 337 aaKnown RBP6.19□□□□□ -1.42
LRIT3-201ENST00000327908 SYNPO2Q9UMS6 1093 aa6.19□□□□□ -1.42
LRIT3-201ENST00000327908 ECM29Q5VYK3 1845 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 DOK7Q18PE1 504 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 IDI2Q9BXS1 227 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 ABCF2Q9UG63 623 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 CCDC171Q6TFL3 1326 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 SMARCA5O60264 1052 aaPredicted RBP6.18□□□□□ -1.42
LRIT3-201ENST00000327908 GMPSP49915 693 aaPredicted RBP6.18□□□□□ -1.42
LRIT3-201ENST00000327908 SBK1Q52WX2 424 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 RBM46Q8TBY0 533 aaKnown RBP6.18□□□□□ -1.42
LRIT3-201ENST00000327908 RILPL2Q969X0 211 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 EHD4Q9H223 541 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 CNNM2Q9H8M5 875 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 GJA3Q9Y6H8 435 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 HMGB1P09429 215 aaKnown RBP6.18□□□□□ -1.42
LRIT3-201ENST00000327908 SDSP20132 328 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 SLC9C2Q5TAH2 1124 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 NSUN4Q96CB9 384 aaKnown RBP6.18□□□□□ -1.42
LRIT3-201ENST00000327908 CCDC17Q96LX7 622 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 PGAP2Q9UHJ9 254 aa6.18□□□□□ -1.42
LRIT3-201ENST00000327908 HERC5Q9UII4 1024 aaKnown RBP6.18□□□□□ -1.42
LRIT3-201ENST00000327908 CNOT7Q9UIV1 285 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms