RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 KDRP35968 1356 aa17.49■□□□□ 0.39
VARS2-201ENST00000321897 ERCC3P19447 782 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 TXLNBQ8N3L3 684 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 ERBB3P21860 1342 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 IQSEC2Q5JU85 1478 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 CTAGE5O15320 804 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 NCBP1Q09161 790 aaKnown RBP17.48■□□□□ 0.39
VARS2-201ENST00000321897 RTN1Q16799 776 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 CCDC47Q96A33 483 aaKnown RBP17.48■□□□□ 0.39
VARS2-201ENST00000321897 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 AOX1Q06278 1338 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 FGAP02671 866 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 RASSF4Q9H2L5 321 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 RGS12O14924 1447 aa17.48■□□□□ 0.39
VARS2-201ENST00000321897 ZPR1O75312 459 aa17.47■□□□□ 0.39
VARS2-201ENST00000321897 FAM182BQ5T319 152 aa17.47■□□□□ 0.39
VARS2-201ENST00000321897 CDK5RAP3Q96JB5 506 aa17.47■□□□□ 0.39
VARS2-201ENST00000321897 PLEKHG1Q9ULL1 1385 aa17.47■□□□□ 0.39
VARS2-201ENST00000321897 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
VARS2-201ENST00000321897 POLA2Q14181 598 aa17.47■□□□□ 0.39
VARS2-201ENST00000321897 EPB41L2O43491 1005 aaKnown RBP17.47■□□□□ 0.39
VARS2-201ENST00000321897 GREM2Q9H772 168 aa17.47■□□□□ 0.39
VARS2-201ENST00000321897 ARHGAP31Q2M1Z3 1444 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 RHOXF2BP0C7M4 288 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 EEF2KMTQ96G04 330 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 RHOXF2Q9BQY4 288 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 CABP5Q9NP86 173 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 LZTFL1Q9NQ48 299 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 ST7Q9NRC1 585 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.46■□□□□ 0.39
VARS2-201ENST00000321897 MPHOSPH10O00566 681 aaKnown RBP17.46■□□□□ 0.39
VARS2-201ENST00000321897 MNAT1P51948 309 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 ZNF827Q17R98 1081 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
VARS2-201ENST00000321897 ZFYP08048 801 aaPredicted RBP17.46■□□□□ 0.38
VARS2-201ENST00000321897 TRMT44Q8IYL2 757 aaKnown RBP17.46■□□□□ 0.38
VARS2-201ENST00000321897 CRACR2AQ9BSW2 395 aa17.46■□□□□ 0.38
VARS2-201ENST00000321897 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 PPARDQ03181 441 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 DDB1Q16531 1140 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 CATIPQ7Z7H3 387 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 KIDINS220Q9ULH0 1771 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 ADGRB1O14514 1584 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 KCNG4Q8TDN1 519 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 COBLO75128 1261 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 TTF1Q15361 905 aaPredicted RBP17.45■□□□□ 0.38
VARS2-201ENST00000321897 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
VARS2-201ENST00000321897 CAMSAP1Q5T5Y3 1602 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 MYO3AQ8NEV4 1616 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 KIF5CO60282 957 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 KIAA0754O94854 1291 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 PHKA1P46020 1223 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
VARS2-201ENST00000321897 SDR42E1Q8WUS8 393 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 CLIC6Q96NY7 704 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 MAGEC2Q9UBF1 373 aaPredicted RBP17.44■□□□□ 0.38
VARS2-201ENST00000321897 IQGAP1P46940 1657 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
VARS2-201ENST00000321897 ATP10DQ9P241 1426 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 PDIA4P13667 645 aaKnown RBP17.44■□□□□ 0.38
VARS2-201ENST00000321897 NBPF5PQ86XG9 351 aaPredicted RBP17.44■□□□□ 0.38
VARS2-201ENST00000321897 CCDC150Q8NCX0 1101 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 WASF1Q92558 559 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 TM6SF1Q9BZW5 370 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 CLSTN2Q9H4D0 955 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 PCDH11XQ9BZA7 1347 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 PCDH11YQ9BZA8 1340 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 FAM170AA1A519 330 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 IDEP14735 1019 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 APPBP2Q92624 585 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
VARS2-201ENST00000321897 FAM107BQ9H098 131 aa17.44■□□□□ 0.38
VARS2-201ENST00000321897 A0A0G2JLW4 131 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 CCDC196A0A1B0GTZ2 297 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 KRT18P05783 430 aaKnown RBP17.43■□□□□ 0.38
VARS2-201ENST00000321897 FAM160A1Q05DH4 1040 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 GOLGA8FQ08AF8 430 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 GOLGA8DPQ0D2H9 430 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 NEXMIFQ5QGS0 1516 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
VARS2-201ENST00000321897 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 PPP1R1BQ9UD71 204 aaPredicted RBP17.43■□□□□ 0.38
VARS2-201ENST00000321897 SEC31AO94979 1220 aaKnown RBP17.43■□□□□ 0.38
VARS2-201ENST00000321897 OAS2P29728 719 aaKnown RBP17.43■□□□□ 0.38
VARS2-201ENST00000321897 ZNF174Q15697 407 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 NAA16Q6N069 864 aaPredicted RBP17.43■□□□□ 0.38
VARS2-201ENST00000321897 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 C8orf37Q96NL8 207 aa17.43■□□□□ 0.38
VARS2-201ENST00000321897 BCAMP50895 628 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 CCDC152Q4G0S7 254 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 DNAJC21Q5F1R6 531 aaKnown RBP17.42■□□□□ 0.38
VARS2-201ENST00000321897 FBXO38Q6PIJ6 1188 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 DRC1Q96MC2 740 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms