RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 AXDND1Q5T1B0 1012 aaPredicted RBP10.13□□□□□ -0.79
CLK1-201ENST00000321356 OTUD7BQ6GQQ9 843 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 FEZ1Q99689 392 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 SDF4Q9BRK5 362 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 ECM29Q5VYK3 1845 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 PCCAP05165 728 aaPredicted RBP10.13□□□□□ -0.79
CLK1-201ENST00000321356 KIF23Q02241 960 aaPredicted RBP10.13□□□□□ -0.79
CLK1-201ENST00000321356 WASHC4Q2M389 1173 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 DPCR1Q3MIW9 517 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 FILIP1Q7Z7B0 1213 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 CCAR2Q8N163 923 aaKnown RBP10.13□□□□□ -0.79
CLK1-201ENST00000321356 NCOA7Q8NI08 942 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 ERCC4Q92889 916 aaPredicted RBP10.13□□□□□ -0.79
CLK1-201ENST00000321356 PUS7LQ9H0K6 701 aaKnown RBP10.13□□□□□ -0.79
CLK1-201ENST00000321356 COL5A2P05997 1499 aaPredicted RBP10.12□□□□□ -0.79
CLK1-201ENST00000321356 KIF28PB7ZC32 967 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 CMA1P23946 247 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.799e-7■■■□□ 14.9
CLK1-201ENST00000321356 ZAP70P43403 619 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 KCNJ6P48051 423 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 CBX1P83916 185 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 SF3A1Q15459 793 aaKnown RBP10.12□□□□□ -0.79
CLK1-201ENST00000321356 PTPN14Q15678 1187 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 GORABQ5T7V8 394 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 ANO1Q5XXA6 986 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 NBPF3Q9H094 633 aa10.12□□□□□ -0.79
CLK1-201ENST00000321356 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.11□□□□□ -0.79
CLK1-201ENST00000321356 GPAA1O43292 621 aa10.11□□□□□ -0.79
CLK1-201ENST00000321356 POLR3DP05423 398 aaPredicted RBP10.11□□□□□ -0.79
CLK1-201ENST00000321356 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
CLK1-201ENST00000321356 NLRP12P59046 1061 aa10.11□□□□□ -0.79
CLK1-201ENST00000321356 NCAPHQ15003 741 aa10.11□□□□□ -0.79
CLK1-201ENST00000321356 ZNF512BQ96KM6 892 aaPredicted RBP10.11□□□□□ -0.79
CLK1-201ENST00000321356 TIGD1Q96MW7 591 aa10.11□□□□□ -0.79
CLK1-201ENST00000321356 PRDM10Q9NQV6 1147 aa10.11□□□□□ -0.79
CLK1-201ENST00000321356 CGNQ9P2M7 1197 aaKnown RBP10.11□□□□□ -0.79
CLK1-201ENST00000321356 MROH7-TTC4A0A0A0MT08 1334 aa10.11□□□□□ -0.79
CLK1-201ENST00000321356 ZMYM6O95789 1325 aa10.11□□□□□ -0.79
CLK1-201ENST00000321356 MYH3P11055 1940 aa10.11□□□□□ -0.79
CLK1-201ENST00000321356 FAM237AA0A1B0GTK4 181 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 KIF2AO00139 706 aaPredicted RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 ZNF213O14771 459 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 CPLX1O14810 134 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 IKBKBO14920 756 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 ZNF202O95125 648 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 SLC3A2P08195 630 aaKnown RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 PFKFB1P16118 471 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 DHX8Q14562 1220 aaKnown RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 SLC39A14Q15043 492 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 PI16Q6UXB8 463 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 RALYLQ86SE5 291 aaKnown RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 CCDC150Q8NCX0 1101 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 XPO4Q9C0E2 1151 aaKnown RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 GJB4Q9NTQ9 266 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 RIPOR2Q9Y4F9 1068 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 MYO5AQ9Y4I1 1855 aaKnown RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 CDHR2Q9BYE9 1310 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 ANKRD36CQ5JPF3 1778 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 ADD2P35612 726 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 MCAMP43121 646 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 NAA30Q147X3 362 aaPredicted RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 ZBTB38Q8NAP3 1195 aaPredicted RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 GTPBP4Q9BZE4 634 aaKnown RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 OGFRQ9NZT2 677 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 TUBE1Q9UJT0 475 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 ANGEL1Q9UNK9 670 aaKnown RBP10.1□□□□□ -0.79
CLK1-201ENST00000321356 HPSEQ9Y251 543 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 ABCA3Q99758 1704 aa10.1□□□□□ -0.79
CLK1-201ENST00000321356 LRP6O75581 1613 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 ARAP2Q8WZ64 1704 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.09□□□□□ -0.79
CLK1-201ENST00000321356 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 SH2B2O14492 632 aaPredicted RBP10.09□□□□□ -0.79
CLK1-201ENST00000321356 PPP6R2O75170 966 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 WDHD1O75717 1129 aaPredicted RBP10.09□□□□□ -0.79
CLK1-201ENST00000321356 IL2RBP14784 551 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 IFIT5Q13325 482 aaKnown RBP10.09□□□□□ -0.79
CLK1-201ENST00000321356 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
CLK1-201ENST00000321356 HSP90AB3PQ58FF7 597 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
CLK1-201ENST00000321356 ARMCX5Q6P1M9 558 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 TOM1L2Q6ZVM7 507 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 VGLL2Q8N8G2 317 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 FAM89AQ96GI7 184 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 CARD10Q9BWT7 1032 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.09□□□□□ -0.793e-11■□□□□ 10.1
CLK1-201ENST00000321356 IFNKQ9P0W0 207 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 XIRP1Q702N8 1843 aaKnown RBP10.09□□□□□ -0.79
CLK1-201ENST00000321356 LRP5O75197 1615 aa10.09□□□□□ -0.79
CLK1-201ENST00000321356 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
CLK1-201ENST00000321356 PTPAQ15257 358 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 APOA5Q6Q788 366 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 CYB5R4Q7L1T6 521 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 RAB11FIP4Q86YS3 637 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 TBC1D10CQ8IV04 446 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 KIF18AQ8NI77 898 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 NKX2-3Q8TAU0 364 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 ZNF592Q92610 1267 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms