RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PHF14O94880 888 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 SF3B3Q15393 1217 aaKnown RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 TTC6Q86TZ1 520 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 MB21D2Q8IYB1 491 aaPredicted RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 STRBPQ96SI9 672 aaKnown RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 DENND2AQ9ULE3 1009 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 LRP2BPQ9P2M1 347 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 NARFQ9UHQ1 456 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 RTCBQ9Y3I0 505 aaKnown RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 MBD4O95243 580 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 GYG1P46976 350 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 ANTXR2P58335 489 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 HMGN5P82970 282 aaKnown RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 AMIGO3Q86WK7 504 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 NBPF5PQ86XG9 351 aaPredicted RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 RAB11FIP4Q86YS3 637 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 FBXL16Q8N461 479 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 CELF1Q92879 486 aaKnown RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 TRIM44Q96DX7 344 aaPredicted RBP8.91□□□□□ -0.98
IFT88-201ENST00000319980 NBPF3Q9H094 633 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 ARMT1Q9H993 441 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 ABCF2Q9UG63 623 aa8.91□□□□□ -0.98
IFT88-201ENST00000319980 MYH3P11055 1940 aa8.9□□□□□ -0.98
IFT88-201ENST00000319980 KLF18A0A0U1RQI7 1052 aa8.9□□□□□ -0.98
IFT88-201ENST00000319980 CCDC183Q5T5S1 534 aa8.9□□□□□ -0.98
IFT88-201ENST00000319980 TBC1D10CQ8IV04 446 aa8.9□□□□□ -0.98
IFT88-201ENST00000319980 BSDC1Q9NW68 430 aaPredicted RBP8.9□□□□□ -0.98
IFT88-201ENST00000319980 MINPP1Q9UNW1 487 aa8.9□□□□□ -0.98
IFT88-201ENST00000319980 NPHP1O15259 732 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 EVCP57679 992 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 VPS37DQ86XT2 251 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 FAM43AQ8N2R8 423 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 ARHGEF1Q92888 912 aaKnown RBP8.9□□□□□ -0.99
IFT88-201ENST00000319980 SPATA32Q96LK8 384 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 NLRP3Q96P20 1036 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 SCAND2PQ9GZW5 306 aaPredicted RBP8.9□□□□□ -0.99
IFT88-201ENST00000319980 TSPY26PQ9H489 355 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 KIF3AQ9Y496 699 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 NHSQ6T4R5 1651 aa8.9□□□□□ -0.99
IFT88-201ENST00000319980 GOLGA6L4A6NEF3 574 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 GOLGA8BA8MQT2 603 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 PATL2C9JE40 543 aaKnown RBP8.89□□□□□ -0.99
IFT88-201ENST00000319980 GUCY1B3Q02153 619 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 CCDC173Q0VFZ6 552 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 TPTE2Q6XPS3 522 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 SEPT12Q8IYM1 358 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 IFNL3Q8IZI9 196 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 MIGA1Q8NAN2 632 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 NKX2-3Q8TAU0 364 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 NYXQ9GZU5 481 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 NAPBQ9H115 298 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 INCENPQ9NQS7 918 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 B4E1Z4 1266 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 PRKAB2O43741 272 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 CEBPZQ03701 1054 aaKnown RBP8.89□□□□□ -0.99
IFT88-201ENST00000319980 RESTQ13127 1097 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 SLC10A5Q5PT55 438 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 ZSCAN16Q9H4T2 348 aaPredicted RBP8.89□□□□□ -0.99
IFT88-201ENST00000319980 EPB41L4AQ9HCS5 686 aaPredicted RBP8.89□□□□□ -0.99
IFT88-201ENST00000319980 TCHHQ07283 1943 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 AKAP11Q9UKA4 1901 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 CPLX1O14810 134 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 RPS8P62241 208 aaKnown RBP8.89□□□□□ -0.99
IFT88-201ENST00000319980 UBE4AQ14139 1066 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 CAVIN4Q5BKX8 364 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 CHMP4CQ96CF2 233 aa8.89□□□□□ -0.99
IFT88-201ENST00000319980 GNL3LQ9NVN8 582 aaKnown RBP8.89□□□□□ -0.99
IFT88-201ENST00000319980 CASZ1Q86V15 1759 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 GSG1L2A8MUP6 293 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 DHX16O60231 1041 aaKnown RBP8.88□□□□□ -0.99
IFT88-201ENST00000319980 ELP1O95163 1332 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 FDPSP14324 419 aaKnown RBP8.88□□□□□ -0.99
IFT88-201ENST00000319980 RFC4P35249 363 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 NAA16Q6N069 864 aaPredicted RBP8.88□□□□□ -0.99
IFT88-201ENST00000319980 GIMAP6Q6P9H5 292 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 CYB5R4Q7L1T6 521 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 KRT27Q7Z3Y8 459 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 LCORLQ8N3X6 602 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 LEO1Q8WVC0 666 aaPredicted RBP8.88□□□□□ -0.99
IFT88-201ENST00000319980 EP400Q96L91 3159 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 RRAGDQ9NQL2 400 aaPredicted RBP8.88□□□□□ -0.99
IFT88-201ENST00000319980 SALL1Q9NSC2 1324 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 RAI14Q9P0K7 980 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 ANGEL1Q9UNK9 670 aaKnown RBP8.88□□□□□ -0.99
IFT88-201ENST00000319980 HPS5Q9UPZ3 1129 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 SLC4A4Q9Y6R1 1079 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 LETM1O95202 739 aaPredicted RBP8.88□□□□□ -0.99
IFT88-201ENST00000319980 TDO2P48775 406 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 CTDSPL2Q05D32 466 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 STK11IPQ8N1F8 1099 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 FAM84BQ96KN1 310 aaPredicted RBP8.88□□□□□ -0.99
IFT88-201ENST00000319980 PPP1R9BQ96SB3 815 aa8.88□□□□□ -0.99
IFT88-201ENST00000319980 ZNF804BA4D1E1 1349 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 NEDD4P46934 1319 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 RGL2O15211 777 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 RXRAP19793 462 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 CYP7A1P22680 504 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 ALX1Q15699 326 aa8.87□□□□□ -0.99
IFT88-201ENST00000319980 TRAPPC3LQ5T215 181 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms