RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 TM4SF1P30408 202 aa21.5■■□□□ 1.03
SHISA3-201ENST00000319234 MAGEB6Q8N7X4 407 aa21.5■■□□□ 1.03
SHISA3-201ENST00000319234 BRF1Q92994 677 aa21.5■■□□□ 1.03
SHISA3-201ENST00000319234 GTF3C6Q969F1 213 aa21.5■■□□□ 1.03
SHISA3-201ENST00000319234 ANKRD2Q9GZV1 360 aa21.5■■□□□ 1.03
SHISA3-201ENST00000319234 A0A1B0GUL6 1792 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 MYO5AQ9Y4I1 1855 aaKnown RBP21.49■■□□□ 1.03
SHISA3-201ENST00000319234 ZNF213O14771 459 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 CAVIN4Q5BKX8 364 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 AIDAQ96BJ3 306 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 STRBPQ96SI9 672 aaKnown RBP21.49■■□□□ 1.03
SHISA3-201ENST00000319234 LRRC2Q9BYS8 371 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 LAMA4Q16363 1823 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 BRWD3Q6RI45 1802 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 DOCK2Q92608 1830 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 TAF1P21675 1872 aa21.49■■□□□ 1.03
SHISA3-201ENST00000319234 GYG1P46976 350 aa21.48■■□□□ 1.03
SHISA3-201ENST00000319234 HAND2P61296 217 aa21.48■■□□□ 1.03
SHISA3-201ENST00000319234 STK3Q13188 491 aa21.48■■□□□ 1.03
SHISA3-201ENST00000319234 HMGB2P26583 209 aaKnown RBP21.48■■□□□ 1.03
SHISA3-201ENST00000319234 DNM1Q05193 864 aaKnown RBP21.48■■□□□ 1.03
SHISA3-201ENST00000319234 FBXL16Q8N461 479 aa21.48■■□□□ 1.03
SHISA3-201ENST00000319234 LARP1BQ659C4 914 aaKnown RBP21.47■■□□□ 1.03
SHISA3-201ENST00000319234 CNBD1Q8NA66 436 aa21.47■■□□□ 1.03
SHISA3-201ENST00000319234 ELP1O95163 1332 aa21.47■■□□□ 1.03
SHISA3-201ENST00000319234 VPS37CA5D8V6 355 aaPredicted RBP21.47■■□□□ 1.03
SHISA3-201ENST00000319234 WTIPA6NIX2 430 aaPredicted RBP21.47■■□□□ 1.03
SHISA3-201ENST00000319234 PFKFB2O60825 505 aa21.47■■□□□ 1.03
SHISA3-201ENST00000319234 RBM6P78332 1123 aaKnown RBP21.47■■□□□ 1.03
SHISA3-201ENST00000319234 ALX1Q15699 326 aa21.47■■□□□ 1.03
SHISA3-201ENST00000319234 FAM84BQ96KN1 310 aaPredicted RBP21.47■■□□□ 1.03
SHISA3-201ENST00000319234 LRP2BPQ9P2M1 347 aa21.47■■□□□ 1.03
SHISA3-201ENST00000319234 UBR3Q6ZT12 1888 aa21.46■■□□□ 1.03
SHISA3-201ENST00000319234 APPP05067 770 aa21.46■■□□□ 1.03
SHISA3-201ENST00000319234 KRT85P78386 507 aa21.46■■□□□ 1.03
SHISA3-201ENST00000319234 ZNF772Q68DY9 489 aaPredicted RBP21.46■■□□□ 1.03
SHISA3-201ENST00000319234 FBXO33Q7Z6M2 555 aa21.46■■□□□ 1.03
SHISA3-201ENST00000319234 DENND2AQ9ULE3 1009 aa21.46■■□□□ 1.03
SHISA3-201ENST00000319234 PATL2C9JE40 543 aaKnown RBP21.45■■□□□ 1.02
SHISA3-201ENST00000319234 GYS1P13807 737 aa21.45■■□□□ 1.02
SHISA3-201ENST00000319234 VPS37DQ86XT2 251 aa21.45■■□□□ 1.02
SHISA3-201ENST00000319234 NCOA7Q8NI08 942 aa21.45■■□□□ 1.02
SHISA3-201ENST00000319234 FUCA2Q9BTY2 467 aa21.45■■□□□ 1.02
SHISA3-201ENST00000319234 IQSEC3Q9UPP2 1182 aaPredicted RBP21.45■■□□□ 1.02
SHISA3-201ENST00000319234 ZMYM6O95789 1325 aa21.45■■□□□ 1.02
SHISA3-201ENST00000319234 DTNBO60941 627 aa21.45■■□□□ 1.02
SHISA3-201ENST00000319234 MBD4O95243 580 aa21.45■■□□□ 1.02
SHISA3-201ENST00000319234 PTMAP06454 111 aaKnown RBP21.45■■□□□ 1.02
SHISA3-201ENST00000319234 APOBRQ0VD83 1088 aa21.45■■□□□ 1.02
SHISA3-201ENST00000319234 MB21D2Q8IYB1 491 aaPredicted RBP21.45■■□□□ 1.02
SHISA3-201ENST00000319234 SEMA3EO15041 775 aa21.44■■□□□ 1.02
SHISA3-201ENST00000319234 RRP9O43818 475 aaKnown RBP21.44■■□□□ 1.02
SHISA3-201ENST00000319234 ZNF274Q96GC6 653 aaPredicted RBP21.44■■□□□ 1.02
SHISA3-201ENST00000319234 LLPHQ9BRT6 129 aaKnown RBP21.44■■□□□ 1.02
SHISA3-201ENST00000319234 TNRC6CQ9HCJ0 1690 aaKnown RBP21.44■■□□□ 1.02
SHISA3-201ENST00000319234 GNAT2P19087 354 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 SCRN1Q12765 414 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 GRAPQ13588 217 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 PRR5LQ6MZQ0 368 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 CHST3Q7LGC8 479 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 RALYLQ86SE5 291 aaKnown RBP21.43■■□□□ 1.02
SHISA3-201ENST00000319234 GRAPLQ8TC17 118 aaPredicted RBP21.43■■□□□ 1.02
SHISA3-201ENST00000319234 PNPLA7Q6ZV29 1317 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 WDR19Q8NEZ3 1342 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 EVCP57679 992 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 CHMP4CQ96CF2 233 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 NBPF3Q9H094 633 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 ARMT1Q9H993 441 aa21.43■■□□□ 1.02
SHISA3-201ENST00000319234 PRC1O43663 620 aa21.42■■□□□ 1.02
SHISA3-201ENST00000319234 IFNL3Q8IZI9 196 aa21.42■■□□□ 1.02
SHISA3-201ENST00000319234 PROM2Q8N271 834 aa21.42■■□□□ 1.02
SHISA3-201ENST00000319234 TRDNQ13061 729 aa21.41■■□□□ 1.02
SHISA3-201ENST00000319234 SCAND2PQ9GZW5 306 aaPredicted RBP21.41■■□□□ 1.02
SHISA3-201ENST00000319234 ABCF2Q9UG63 623 aa21.41■■□□□ 1.02
SHISA3-201ENST00000319234 COL1A1P02452 1464 aaPredicted RBP21.41■■□□□ 1.02
SHISA3-201ENST00000319234 SERPINB2P05120 415 aa21.41■■□□□ 1.02
SHISA3-201ENST00000319234 CYP7A1P22680 504 aa21.41■■□□□ 1.02
SHISA3-201ENST00000319234 PDIA3P30101 505 aaKnown RBP21.41■■□□□ 1.02
SHISA3-201ENST00000319234 HIBADHP31937 336 aaKnown RBP21.41■■□□□ 1.02
SHISA3-201ENST00000319234 CDC37L1Q7L3B6 337 aa21.41■■□□□ 1.02
SHISA3-201ENST00000319234 SMARCC2Q8TAQ2 1214 aa21.41■■□□□ 1.02
SHISA3-201ENST00000319234 RAI14Q9P0K7 980 aa21.41■■□□□ 1.02
SHISA3-201ENST00000319234 PDS5AQ29RF7 1337 aaKnown RBP21.41■■□□□ 1.02
SHISA3-201ENST00000319234 GSG1L2A8MUP6 293 aa21.4■■□□□ 1.02
SHISA3-201ENST00000319234 ZBTB22O15209 634 aa21.4■■□□□ 1.02
SHISA3-201ENST00000319234 JAK2O60674 1132 aa21.4■■□□□ 1.02
SHISA3-201ENST00000319234 KLRK1P26718 216 aa21.4■■□□□ 1.02
SHISA3-201ENST00000319234 ST5P78524 1137 aa21.4■■□□□ 1.02
SHISA3-201ENST00000319234 TBC1D10CQ8IV04 446 aa21.4■■□□□ 1.02
SHISA3-201ENST00000319234 LCORLQ8N3X6 602 aa21.4■■□□□ 1.02
SHISA3-201ENST00000319234 NAPBQ9H115 298 aa21.4■■□□□ 1.02
SHISA3-201ENST00000319234 EPB41L4AQ9HCS5 686 aaPredicted RBP21.4■■□□□ 1.02
SHISA3-201ENST00000319234 KDM4AO75164 1064 aa21.39■■□□□ 1.02
SHISA3-201ENST00000319234 ANTXR2P58335 489 aa21.39■■□□□ 1.02
SHISA3-201ENST00000319234 KIAA2012Q0VF49 1180 aa21.39■■□□□ 1.02
SHISA3-201ENST00000319234 USP25Q9UHP3 1055 aa21.39■■□□□ 1.02
SHISA3-201ENST00000319234 TTC6Q86TZ1 520 aa21.39■■□□□ 1.01
SHISA3-201ENST00000319234 NACAP1Q9BZK3 213 aa21.39■■□□□ 1.01
SHISA3-201ENST00000319234 TFCP2L1Q9NZI6 479 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms