RNA–Protein interactions for RNA: ENST00000316157.7

LARP4B-201, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LARP4B, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-201ENST00000316157 SYCP1Q15431 976 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 PHLPP1O60346 1717 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
LARP4B-201ENST00000316157 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
LARP4B-201ENST00000316157 PPFIBP1Q86W92 1011 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
LARP4B-201ENST00000316157 TIGD1Q96MW7 591 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 RNF187Q5TA31 235 aaPredicted RBP13.14□□□□□ -0.31
LARP4B-201ENST00000316157 CFAP57Q96MR6 1250 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 PRPF40BQ6NWY9 871 aaKnown RBP13.14□□□□□ -0.31
LARP4B-201ENST00000316157 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 MROH1Q8NDA8 1641 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 SERPINC1P01008 464 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 FAM177A1Q8N128 213 aaPredicted RBP13.14□□□□□ -0.31
LARP4B-201ENST00000316157 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 USP40Q9NVE5 1235 aa13.14□□□□□ -0.31
LARP4B-201ENST00000316157 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 CCDC192P0DO97 292 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 SCLT1Q96NL6 688 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
LARP4B-201ENST00000316157 HLFQ16534 295 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
LARP4B-201ENST00000316157 GREM2Q9H772 168 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 STAMBPO95630 424 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 ITPK1Q13572 414 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 SEPT6Q14141 434 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 PAF1Q8N7H5 531 aa13.13□□□□□ -0.31
LARP4B-201ENST00000316157 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 KLHDC4Q8TBB5 520 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 KDRP35968 1356 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 AOC3Q16853 763 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
LARP4B-201ENST00000316157 B4DLN1 442 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 GYG1P46976 350 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 MRPL12P52815 198 aaKnown RBP13.11□□□□□ -0.31
LARP4B-201ENST00000316157 TIMM10P62072 90 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
LARP4B-201ENST00000316157 PAG1Q9NWQ8 432 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 HACL1Q9UJ83 578 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 KRT32Q14532 448 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 VAT1LQ9HCJ6 419 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 CDK5RAP3Q96JB5 506 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 CYP46A1Q9Y6A2 500 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 SOCS7O14512 581 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 TBC1D10BQ4KMP7 808 aaPredicted RBP13.11□□□□□ -0.31
LARP4B-201ENST00000316157 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 AS3MTQ9HBK9 375 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 TGFB2P61812 414 aa13.11□□□□□ -0.31
LARP4B-201ENST00000316157 KIF2AO00139 706 aaPredicted RBP13.1□□□□□ -0.31
LARP4B-201ENST00000316157 TANGO6Q9C0B7 1094 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
LARP4B-201ENST00000316157 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
LARP4B-201ENST00000316157 SMC1AQ14683 1233 aaKnown RBP13.1□□□□□ -0.31
LARP4B-201ENST00000316157 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 GADL1Q6ZQY3 521 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 CATIPQ7Z7H3 387 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.1□□□□□ -0.316e-7■■■■□ 24.7
LARP4B-201ENST00000316157 KIF1AQ12756 1690 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 PABPC4Q13310 644 aaKnown RBP eCLIP13.1□□□□□ -0.319e-7■■□□□ 12.2
LARP4B-201ENST00000316157 MAP9Q49MG5 647 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 DAAM2Q86T65 1068 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
LARP4B-201ENST00000316157 BLOC1S2Q6QNY1 142 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
LARP4B-201ENST00000316157 GNAT2P19087 354 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 IREB2P48200 963 aaKnown RBP13.09□□□□□ -0.31
LARP4B-201ENST00000316157 ZYXQ15942 572 aaKnown RBP13.09□□□□□ -0.31
LARP4B-201ENST00000316157 LUZP1Q86V48 1076 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 CBFA2T2O43439 604 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 CDKL5O76039 1030 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 USP17L8P0C7I0 530 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 LMNB1P20700 586 aa13.09□□□□□ -0.31
LARP4B-201ENST00000316157 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
LARP4B-201ENST00000316157 POLR3GO15318 223 aaPredicted RBP13.08□□□□□ -0.32
LARP4B-201ENST00000316157 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.32
LARP4B-201ENST00000316157 HAND2P61296 217 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 TRAF1Q13077 416 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 FILIP1Q7Z7B0 1213 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 AATFQ9NY61 560 aaKnown RBP eCLIP13.08□□□□□ -0.32
LARP4B-201ENST00000316157 TMCO5BA8MYB1 307 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 STK3Q13188 491 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 UBE4AQ14139 1066 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 CCDC175P0C221 793 aa13.08□□□□□ -0.32
LARP4B-201ENST00000316157 TNS2Q63HR2 1409 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms