RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
CGGBP1-201ENST00000309534 CYP21A2P08686 494 aa18.3■□□□□ 0.52
CGGBP1-201ENST00000309534 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
CGGBP1-201ENST00000309534 TBC1D22AQ8WUA7 517 aa18.3■□□□□ 0.52
CGGBP1-201ENST00000309534 ADCK5Q3MIX3 580 aa18.3■□□□□ 0.52
CGGBP1-201ENST00000309534 ARMT1Q9H993 441 aa18.3■□□□□ 0.52
CGGBP1-201ENST00000309534 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
CGGBP1-201ENST00000309534 CYP2E1P05181 493 aaPredicted RBP18.3■□□□□ 0.52
CGGBP1-201ENST00000309534 KLF18A0A0U1RQI7 1052 aa18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 CCDC34Q96HJ3 373 aa18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 SCAND2PQ9GZW5 306 aaPredicted RBP18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 ZSCAN16Q9H4T2 348 aaPredicted RBP18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 FGAP02671 866 aa18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 CELF1Q92879 486 aaKnown RBP18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 IL17RAQ96F46 866 aa18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 FGFR2P21802 821 aa18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 MIGA1Q8NAN2 632 aa18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 BRMS1Q9HCU9 246 aa18.29■□□□□ 0.52
CGGBP1-201ENST00000309534 TTC14Q96N46 770 aa18.28■□□□□ 0.52
CGGBP1-201ENST00000309534 FIBPO43427 364 aa18.28■□□□□ 0.52
CGGBP1-201ENST00000309534 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
CGGBP1-201ENST00000309534 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
CGGBP1-201ENST00000309534 F13A1P00488 732 aa18.28■□□□□ 0.52
CGGBP1-201ENST00000309534 KLHL40Q2TBA0 621 aa18.28■□□□□ 0.52
CGGBP1-201ENST00000309534 GOLGA8AA7E2F4 631 aa18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 METAP2P50579 478 aaKnown RBP eCLIP18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 ZNF274Q96GC6 653 aaPredicted RBP18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 SHANK3Q9BYB0 1731 aa18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 WTAPQ15007 396 aa18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 LRRC2Q9BYS8 371 aa18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 BRD1O95696 1058 aa18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 WWC3Q9ULE0 1092 aa18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.27■□□□□ 0.52
CGGBP1-201ENST00000309534 H0YIN7 160 aa18.27■□□□□ 0.51
CGGBP1-201ENST00000309534 PCP11498 1178 aaKnown RBP18.27■□□□□ 0.51
CGGBP1-201ENST00000309534 CCT2P78371 535 aaKnown RBP18.27■□□□□ 0.51
CGGBP1-201ENST00000309534 IFNL3Q8IZI9 196 aa18.27■□□□□ 0.51
CGGBP1-201ENST00000309534 BICD2Q8TD16 824 aa18.27■□□□□ 0.51
CGGBP1-201ENST00000309534 PUS7LQ9H0K6 701 aaKnown RBP18.27■□□□□ 0.51
CGGBP1-201ENST00000309534 MRE11P49959 708 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 CAVIN1Q6NZI2 390 aaKnown RBP18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 ZBTB43O43298 467 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 APOBRQ0VD83 1088 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 SCARF1Q14162 830 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 C8orf76Q96K31 380 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 SYT1P21579 422 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 ALX1Q15699 326 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 ME3Q16798 604 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
CGGBP1-201ENST00000309534 RANBP6O60518 1105 aaKnown RBP18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 VGLL2Q8N8G2 317 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 IL25Q9H293 177 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 ANGEL1Q9UNK9 670 aaKnown RBP18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 NPR1P16066 1061 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 PRR5LQ6MZQ0 368 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 CATIPQ7Z7H3 387 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 GTF3C6Q969F1 213 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 MKNK2Q9HBH9 465 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 WDR19Q8NEZ3 1342 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 PLSCR1O15162 318 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 NT5C2P49902 561 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 FOSBP53539 338 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 AKNAD1Q5T1N1 836 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 CCDC73Q6ZRK6 1079 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 CRAMP1Q96RY5 1269 aa18.25■□□□□ 0.51
CGGBP1-201ENST00000309534 PPEF1O14829 653 aaPredicted RBP18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 MPNDQ8N594 471 aa18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 SPATA32Q96LK8 384 aa18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 TPCN1Q9ULQ1 816 aa18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 PFKFB2O60825 505 aa18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 DPP8Q6V1X1 898 aaPredicted RBP18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 WNK3Q9BYP7 1800 aa18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 STRBPQ96SI9 672 aaKnown RBP18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 ORC3Q9UBD5 711 aaPredicted RBP18.24■□□□□ 0.51
CGGBP1-201ENST00000309534 SSRP1Q08945 709 aaKnown RBP18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 ZNF444Q8N0Y2 327 aaPredicted RBP18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 JMYQ8N9B5 988 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 NUP188Q5SRE5 1749 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 CALM1P0DP23 149 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 CALM2P0DP24 149 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 CALM3P0DP25 149 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 STK11IPQ8N1F8 1099 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 BRIP1Q9BX63 1249 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 IARSP41252 1262 aaKnown RBP18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 TTLL5Q6EMB2 1281 aa18.23■□□□□ 0.51
CGGBP1-201ENST00000309534 GYS1P13807 737 aa18.22■□□□□ 0.51
CGGBP1-201ENST00000309534 CTCFLQ8NI51 663 aaPredicted RBP18.22■□□□□ 0.51
CGGBP1-201ENST00000309534 CNKSR1Q969H4 720 aa18.22■□□□□ 0.51
CGGBP1-201ENST00000309534 PNPLA7Q6ZV29 1317 aa18.22■□□□□ 0.51
CGGBP1-201ENST00000309534 PPP2R5BQ15173 497 aa18.22■□□□□ 0.51
CGGBP1-201ENST00000309534 ARPP21Q9UBL0 812 aaPredicted RBP18.22■□□□□ 0.51
CGGBP1-201ENST00000309534 PTPDC1A2A3K4 754 aa18.22■□□□□ 0.51
CGGBP1-201ENST00000309534 BCL2L12Q9HB09 334 aa18.22■□□□□ 0.51
CGGBP1-201ENST00000309534 FAM84BQ96KN1 310 aaPredicted RBP18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 B4E1Z4 1266 aa18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 ATP8A2Q9NTI2 1148 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms