RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 B4E1Z4 1266 aa17.1■□□□□ 0.33
RUNX3-201ENST00000308873 SLFN14P0C7P3 912 aa17.1■□□□□ 0.33
RUNX3-201ENST00000308873 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
RUNX3-201ENST00000308873 NLRP12P59046 1061 aa17.1■□□□□ 0.33
RUNX3-201ENST00000308873 DSCC1Q9BVC3 393 aa17.1■□□□□ 0.33
RUNX3-201ENST00000308873 RTEL1Q9NZ71 1219 aa17.1■□□□□ 0.33
RUNX3-201ENST00000308873 AKAP12Q02952 1782 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 EYA2O00167 538 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 WDHD1O75717 1129 aaPredicted RBP17.09■□□□□ 0.33
RUNX3-201ENST00000308873 STX17P56962 302 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 EVCP57679 992 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 METTL24Q5JXM2 366 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 VPS37DQ86XT2 251 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 HELBQ8NG08 1087 aaPredicted RBP17.09■□□□□ 0.33
RUNX3-201ENST00000308873 LZTFL1Q9NQ48 299 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 CNNM1Q9NRU3 951 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
RUNX3-201ENST00000308873 DIP2BQ9P265 1576 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 EXOSC10Q01780 885 aaKnown RBP17.09■□□□□ 0.33
RUNX3-201ENST00000308873 SLC9C2Q5TAH2 1124 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 NEK11Q8NG66 645 aa17.09■□□□□ 0.33
RUNX3-201ENST00000308873 PHKG2P15735 406 aa17.08■□□□□ 0.33
RUNX3-201ENST00000308873 SCARF1Q14162 830 aa17.08■□□□□ 0.33
RUNX3-201ENST00000308873 ZNF274Q96GC6 653 aaPredicted RBP17.08■□□□□ 0.33
RUNX3-201ENST00000308873 XAGE2Q96GT9 111 aa17.08■□□□□ 0.33
RUNX3-201ENST00000308873 FOXN1O15353 648 aa17.08■□□□□ 0.32
RUNX3-201ENST00000308873 GPAA1O43292 621 aa17.08■□□□□ 0.32
RUNX3-201ENST00000308873 GYS2P54840 703 aa17.08■□□□□ 0.32
RUNX3-201ENST00000308873 ALDH8A1Q9H2A2 487 aaPredicted RBP17.08■□□□□ 0.32
RUNX3-201ENST00000308873 COBLO75128 1261 aa17.08■□□□□ 0.32
RUNX3-201ENST00000308873 CASQ1P31415 396 aa17.08■□□□□ 0.32
RUNX3-201ENST00000308873 ETF1P62495 437 aaKnown RBP17.08■□□□□ 0.32
RUNX3-201ENST00000308873 GRAMD1CQ8IYS0 662 aa17.08■□□□□ 0.32
RUNX3-201ENST00000308873 MYL5Q02045 173 aa17.07■□□□□ 0.32
RUNX3-201ENST00000308873 LRRFIP1Q32MZ4 808 aaKnown RBP17.07■□□□□ 0.32
RUNX3-201ENST00000308873 JMYQ8N9B5 988 aa17.07■□□□□ 0.32
RUNX3-201ENST00000308873 KRT40Q6A162 431 aa17.07■□□□□ 0.32
RUNX3-201ENST00000308873 PUF60Q9UHX1 559 aaKnown RBP17.07■□□□□ 0.32
RUNX3-201ENST00000308873 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
RUNX3-201ENST00000308873 DIP2AQ14689 1571 aa17.07■□□□□ 0.32
RUNX3-201ENST00000308873 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
RUNX3-201ENST00000308873 CCDC102BQ68D86 513 aa17.07■□□□□ 0.32
RUNX3-201ENST00000308873 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
RUNX3-201ENST00000308873 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 PLBD2Q8NHP8 589 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
RUNX3-201ENST00000308873 KCNJ14Q9UNX9 436 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 CBFA2T2O43439 604 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 AFMP43652 599 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 SYCP1Q15431 976 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 ZNF446Q9NWS9 450 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 IMPACTQ9P2X3 320 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
RUNX3-201ENST00000308873 LDHAL6AQ6ZMR3 332 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 KIF23Q02241 960 aaPredicted RBP17.05■□□□□ 0.32
RUNX3-201ENST00000308873 MCM6Q14566 821 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 TMEM67Q5HYA8 995 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 SENP2Q9HC62 589 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 IFIT3O14879 490 aaKnown RBP17.05■□□□□ 0.32
RUNX3-201ENST00000308873 SAFBQ15424 915 aaKnown RBP eCLIP17.05■□□□□ 0.32
RUNX3-201ENST00000308873 LONRF3Q496Y0 759 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 TIGD1Q96MW7 591 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 MROH7-TTC4A0A0A0MT08 1334 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 UTYO14607 1347 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
RUNX3-201ENST00000308873 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 STAMQ92783 540 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 IRX2Q9BZI1 471 aaPredicted RBP17.04■□□□□ 0.32
RUNX3-201ENST00000308873 SETD1AO15047 1707 aaKnown RBP17.04■□□□□ 0.32
RUNX3-201ENST00000308873 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
RUNX3-201ENST00000308873 CYP27B1O15528 508 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 YEATS4O95619 227 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 PNMA6AP0CW24 399 aaPredicted RBP17.04■□□□□ 0.32
RUNX3-201ENST00000308873 IFIT5Q13325 482 aaKnown RBP17.04■□□□□ 0.32
RUNX3-201ENST00000308873 ATL3Q6DD88 541 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 AIDAQ96BJ3 306 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 BAG1Q99933 345 aaPredicted RBP17.04■□□□□ 0.32
RUNX3-201ENST00000308873 KCNH3Q9ULD8 1083 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 NFE2L3Q9Y4A8 694 aa17.04■□□□□ 0.32
RUNX3-201ENST00000308873 POLR2DO15514 142 aaKnown RBP17.03■□□□□ 0.32
RUNX3-201ENST00000308873 ZSCAN12O43309 604 aa17.03■□□□□ 0.32
RUNX3-201ENST00000308873 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
RUNX3-201ENST00000308873 ERBB3P21860 1342 aa17.03■□□□□ 0.32
RUNX3-201ENST00000308873 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
RUNX3-201ENST00000308873 ZBTB43O43298 467 aa17.03■□□□□ 0.32
RUNX3-201ENST00000308873 RGPD1P0DJD0 1748 aa17.03■□□□□ 0.32
RUNX3-201ENST00000308873 A0A1W2PQ27 194 aa17.03■□□□□ 0.32
RUNX3-201ENST00000308873 A0A1W2PQ64 194 aa17.03■□□□□ 0.32
RUNX3-201ENST00000308873 A0A1W2PQD8 194 aa17.03■□□□□ 0.32
RUNX3-201ENST00000308873 IQSEC3Q9UPP2 1182 aaPredicted RBP17.03■□□□□ 0.32
RUNX3-201ENST00000308873 CMA1P23946 247 aa17.02■□□□□ 0.32
RUNX3-201ENST00000308873 TNNT3P45378 269 aaPredicted RBP17.02■□□□□ 0.32
RUNX3-201ENST00000308873 FOXO4P98177 505 aa17.02■□□□□ 0.32
RUNX3-201ENST00000308873 POLR3EQ9NVU0 708 aa17.02■□□□□ 0.32
RUNX3-201ENST00000308873 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms