RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
ZNF558-201ENST00000301475 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
ZNF558-201ENST00000301475 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
ZNF558-201ENST00000301475 MYL5Q02045 173 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 MYSM1Q5VVJ2 828 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 SETD1BQ9UPS6 1966 aaKnown RBP12.55□□□□□ -0.4
ZNF558-201ENST00000301475 RFX7Q2KHR2 1363 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 FOXR1Q6PIV2 292 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 ZSWIM4Q9H7M6 989 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 CCDC151A5D8V7 595 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 WDHD1O75717 1129 aaPredicted RBP12.54□□□□□ -0.4
ZNF558-201ENST00000301475 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 GOLGA1Q92805 767 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 PDE11AQ9HCR9 933 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 TUBE1Q9UJT0 475 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 HSP90AA4PQ58FG1 418 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 TNNI3KQ59H18 835 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 ESCO1Q5FWF5 840 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 FPGT-TNNI3KV9GXZ4 949 aa12.54□□□□□ -0.4
ZNF558-201ENST00000301475 DIP2AQ14689 1571 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 E7EWF7 191 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 TXLNAP40222 546 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 TFCP2Q12800 502 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 AIMP1Q12904 312 aaKnown RBP12.53□□□□□ -0.4
ZNF558-201ENST00000301475 BAG1Q99933 345 aaPredicted RBP12.53□□□□□ -0.4
ZNF558-201ENST00000301475 IRX2Q9BZI1 471 aaPredicted RBP12.53□□□□□ -0.4
ZNF558-201ENST00000301475 FANCLQ9NW38 375 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 VPS18Q9P253 973 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 SH3TC1Q8TE82 1336 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 N4BP1O75113 896 aaKnown RBP12.53□□□□□ -0.4
ZNF558-201ENST00000301475 MARCKSP29966 332 aaPredicted RBP12.53□□□□□ -0.4
ZNF558-201ENST00000301475 PNOCQ13519 176 aa12.53□□□□□ -0.4
ZNF558-201ENST00000301475 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
ZNF558-201ENST00000301475 ZNF274Q96GC6 653 aaPredicted RBP12.53□□□□□ -0.4
ZNF558-201ENST00000301475 CMA1P23946 247 aa12.52□□□□□ -0.4
ZNF558-201ENST00000301475 TBX2Q13207 712 aaPredicted RBP12.52□□□□□ -0.4
ZNF558-201ENST00000301475 MCM6Q14566 821 aa12.52□□□□□ -0.4
ZNF558-201ENST00000301475 TC2NQ8N9U0 490 aa12.52□□□□□ -0.4
ZNF558-201ENST00000301475 ANKZF1Q9H8Y5 726 aa12.52□□□□□ -0.4
ZNF558-201ENST00000301475 SUGCTQ9HAC7 445 aa12.52□□□□□ -0.4
ZNF558-201ENST00000301475 LMO7Q8WWI1 1683 aa12.52□□□□□ -0.4
ZNF558-201ENST00000301475 BEND6Q5SZJ8 279 aaPredicted RBP12.52□□□□□ -0.41
ZNF558-201ENST00000301475 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
ZNF558-201ENST00000301475 HAUS7Q99871 368 aa12.52□□□□□ -0.41
ZNF558-201ENST00000301475 MRPL44Q9H9J2 332 aaKnown RBP12.52□□□□□ -0.41
ZNF558-201ENST00000301475 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.41
ZNF558-201ENST00000301475 CDC27P30260 824 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 ADKP55263 362 aaKnown RBP12.51□□□□□ -0.41
ZNF558-201ENST00000301475 ANO1Q5XXA6 986 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
ZNF558-201ENST00000301475 PNKPQ96T60 521 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
ZNF558-201ENST00000301475 PXDNQ92626 1479 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 GOLGA6L9A6NEM1 432 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 PDE4BQ07343 736 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 MTF1Q14872 753 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 BRD3Q15059 726 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 KBTBD3Q8NAB2 608 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 LTN1O94822 1766 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 SYKP43405 635 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 PDILTQ8N807 584 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 ATRIPQ8WXE1 791 aa12.51□□□□□ -0.41
ZNF558-201ENST00000301475 PALLDQ8WX93 1383 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 BMP6P22004 513 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 RFX5P48382 616 aaPredicted RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 CHMP4BP1P59074 171 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 WWC2Q6AWC2 1192 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 ZNF530Q6P9A1 599 aaPredicted RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 LEKR1Q6ZMV7 388 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 PACS2Q86VP3 889 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 DSCC1Q9BVC3 393 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 COPRSQ9NQ92 184 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 HPSEQ9Y251 543 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 FAN1Q9Y2M0 1017 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 STX10O60499 249 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 CUTAO60888 179 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 TFRCP02786 760 aaKnown RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 SHC4Q6S5L8 630 aa12.5□□□□□ -0.41
ZNF558-201ENST00000301475 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 FOXP4Q8IVH2 680 aaPredicted RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 PUF60Q9UHX1 559 aaKnown RBP12.5□□□□□ -0.41
ZNF558-201ENST00000301475 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms