RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 KLHL10Q6JEL2 608 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
COL6A2-201ENST00000300527 AKAP4Q5JQC9 854 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 SIRT1Q96EB6 747 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 A0A1W2PQ27 194 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 A0A1W2PQ64 194 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 A0A1W2PQD8 194 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 PRC1O43663 620 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
COL6A2-201ENST00000300527 GOLGA1Q92805 767 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 IFIT1P09914 478 aaKnown RBP16.86■□□□□ 0.29
COL6A2-201ENST00000300527 CCDC82Q8N4S0 544 aa16.86■□□□□ 0.29
COL6A2-201ENST00000300527 GPR161Q8N6U8 529 aaKnown RBP16.86■□□□□ 0.29
COL6A2-201ENST00000300527 PHKBQ93100 1093 aa16.86■□□□□ 0.29
COL6A2-201ENST00000300527 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
COL6A2-201ENST00000300527 DDX21Q9NR30 783 aaKnown RBP eCLIP16.86■□□□□ 0.29
COL6A2-201ENST00000300527 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
COL6A2-201ENST00000300527 HAUS7Q99871 368 aa16.86■□□□□ 0.29
COL6A2-201ENST00000300527 TOMM22Q9NS69 142 aa16.86■□□□□ 0.29
COL6A2-201ENST00000300527 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
COL6A2-201ENST00000300527 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
COL6A2-201ENST00000300527 ARHGAP6O43182 974 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 N4BP1O75113 896 aaKnown RBP16.85■□□□□ 0.29
COL6A2-201ENST00000300527 JAKMIP3Q5VZ66 844 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 VSTM4Q8IW00 320 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 FBXO18Q8NFZ0 1043 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 A0A0U1RQJ8 604 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 EXOSC10Q01780 885 aaKnown RBP16.85■□□□□ 0.29
COL6A2-201ENST00000300527 KIF4BQ2VIQ3 1234 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 GRAMD1CQ8IYS0 662 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 ATRIPQ8WXE1 791 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 PCDHA5Q9Y5H7 936 aa16.85■□□□□ 0.29
COL6A2-201ENST00000300527 APPP05067 770 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 PDE4BQ07343 736 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 YEATS4O95619 227 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 STX17P56962 302 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 MICU3Q86XE3 530 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 MPHOSPH8Q99549 860 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 ALG1Q9BT22 464 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 RRP15Q9Y3B9 282 aaKnown RBP16.84■□□□□ 0.29
COL6A2-201ENST00000300527 FOXR1Q6PIV2 292 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
COL6A2-201ENST00000300527 MAST3O60307 1309 aa16.83■□□□□ 0.29
COL6A2-201ENST00000300527 M0R2C6 588 aa16.83■□□□□ 0.29
COL6A2-201ENST00000300527 CHMP4BP1P59074 171 aa16.83■□□□□ 0.29
COL6A2-201ENST00000300527 LONRF3Q496Y0 759 aa16.83■□□□□ 0.29
COL6A2-201ENST00000300527 ANKRD13DQ6ZTN6 518 aa16.83■□□□□ 0.29
COL6A2-201ENST00000300527 MYL10Q9BUA6 226 aa16.83■□□□□ 0.29
COL6A2-201ENST00000300527 KCND1Q9NSA2 647 aa16.83■□□□□ 0.29
COL6A2-201ENST00000300527 SOWAHDA6NJG2 315 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 COBLO75128 1261 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 CMA1P23946 247 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 PSME1Q06323 249 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 FUT8Q9BYC5 575 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 SPATA31D1Q6ZQQ2 1576 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 CDC27P30260 824 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 AXDND1Q5T1B0 1012 aaPredicted RBP16.83■□□□□ 0.28
COL6A2-201ENST00000300527 ZNF274Q96GC6 653 aaPredicted RBP16.83■□□□□ 0.28
COL6A2-201ENST00000300527 POLR3EQ9NVU0 708 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 FAN1Q9Y2M0 1017 aa16.83■□□□□ 0.28
COL6A2-201ENST00000300527 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 DHX16O60231 1041 aaKnown RBP16.82■□□□□ 0.28
COL6A2-201ENST00000300527 ZNF569Q5MCW4 686 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 NFXL1Q6ZNB6 911 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 MRPL44Q9H9J2 332 aaKnown RBP16.82■□□□□ 0.28
COL6A2-201ENST00000300527 DENND2AQ9ULE3 1009 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 TUBB4AP04350 444 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 KIF23Q02241 960 aaPredicted RBP16.82■□□□□ 0.28
COL6A2-201ENST00000300527 CCDC102BQ68D86 513 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 IP6K1Q92551 441 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 GDAP1L1Q96MZ0 367 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 BPIFA3Q9BQP9 254 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 MRFAP1Q9Y605 127 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 FAM193AP78312 1265 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 IMMTQ16891 758 aaKnown RBP16.82■□□□□ 0.28
COL6A2-201ENST00000300527 SHC4Q6S5L8 630 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
COL6A2-201ENST00000300527 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
COL6A2-201ENST00000300527 IKBKBO14920 756 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 HSP90B2PQ58FF3 399 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 RABEP2Q9H5N1 569 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 OSBP2Q969R2 916 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 CHMP4CQ96CF2 233 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 SAMSN1Q9NSI8 373 aaKnown RBP16.81■□□□□ 0.28
COL6A2-201ENST00000300527 TMEM2Q9UHN6 1383 aa16.81■□□□□ 0.28
COL6A2-201ENST00000300527 TXLNAP40222 546 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 NEDD4P46934 1319 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 TRIM29Q14134 588 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 BRAPQ7Z569 592 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 RABGGTAQ92696 567 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 KCNH3Q9ULD8 1083 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 RGPD1P0DJD0 1748 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 RNF113AO15541 343 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms