RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TNNQ9UQP3 1299 aa26.18■■□□□ 1.78
SMCO4-201ENST00000298966 SPDYE2BA6NHP3 402 aa26.17■■□□□ 1.78
SMCO4-201ENST00000298966 SPDYE6P0CI01 402 aa26.17■■□□□ 1.78
SMCO4-201ENST00000298966 NBPF12Q5TAG4 269 aaPredicted RBP26.17■■□□□ 1.78
SMCO4-201ENST00000298966 ANKRD13AQ8IZ07 590 aa26.17■■□□□ 1.78
SMCO4-201ENST00000298966 PCDHAC2Q9Y5I4 1007 aa26.17■■□□□ 1.78
SMCO4-201ENST00000298966 G2E3Q7L622 706 aa26.16■■□□□ 1.78
SMCO4-201ENST00000298966 MKI67P46013 3256 aaKnown RBP26.16■■□□□ 1.78
SMCO4-201ENST00000298966 USP2O75604 605 aaPredicted RBP26.15■■□□□ 1.78
SMCO4-201ENST00000298966 CSF1RP07333 972 aa26.15■■□□□ 1.78
SMCO4-201ENST00000298966 GJA5P36382 358 aa26.15■■□□□ 1.78
SMCO4-201ENST00000298966 GCKRQ14397 625 aa26.15■■□□□ 1.78
SMCO4-201ENST00000298966 ARHGEF6Q15052 776 aa26.15■■□□□ 1.78
SMCO4-201ENST00000298966 C15orf52Q6ZUT6 534 aaKnown RBP26.15■■□□□ 1.78
SMCO4-201ENST00000298966 PRMT6Q96LA8 375 aaPredicted RBP26.15■■□□□ 1.78
SMCO4-201ENST00000298966 ANKRD18BA2A2Z9 1011 aa26.14■■□□□ 1.78
SMCO4-201ENST00000298966 TESPA1A2RU30 521 aaPredicted RBP26.14■■□□□ 1.78
SMCO4-201ENST00000298966 FKBP1AP62942 108 aaKnown RBP26.14■■□□□ 1.78
SMCO4-201ENST00000298966 ZNF804AQ7Z570 1209 aa26.14■■□□□ 1.78
SMCO4-201ENST00000298966 FXR1P51114 621 aaKnown RBP eCLIP26.13■■□□□ 1.77
SMCO4-201ENST00000298966 RBM5P52756 815 aaKnown RBP eCLIP26.13■■□□□ 1.77
SMCO4-201ENST00000298966 RASA3Q14644 834 aa26.13■■□□□ 1.77
SMCO4-201ENST00000298966 PTPN18Q99952 460 aa26.13■■□□□ 1.77
SMCO4-201ENST00000298966 IRS2Q9Y4H2 1338 aa26.13■■□□□ 1.77
SMCO4-201ENST00000298966 CEP290O15078 2479 aa26.12■■□□□ 1.77
SMCO4-201ENST00000298966 SNAP23O00161 211 aa26.12■■□□□ 1.77
SMCO4-201ENST00000298966 TAF5LO75529 589 aa26.12■■□□□ 1.77
SMCO4-201ENST00000298966 IL1R1P14778 569 aa26.12■■□□□ 1.77
SMCO4-201ENST00000298966 CASP7P55210 303 aa26.11■■□□□ 1.77
SMCO4-201ENST00000298966 NBPF11Q86T75 865 aa26.11■■□□□ 1.77
SMCO4-201ENST00000298966 HELBQ8NG08 1087 aaPredicted RBP26.11■■□□□ 1.77
SMCO4-201ENST00000298966 OPTNQ96CV9 577 aa26.11■■□□□ 1.77
SMCO4-201ENST00000298966 ZNF333Q96JL9 665 aa26.11■■□□□ 1.77
SMCO4-201ENST00000298966 ELP3Q9H9T3 547 aa26.11■■□□□ 1.77
SMCO4-201ENST00000298966 OTOFQ9HC10 1997 aa26.11■■□□□ 1.77
SMCO4-201ENST00000298966 CENPFP49454 3210 aa26.1■■□□□ 1.77
SMCO4-201ENST00000298966 A0A1B0GUL6 1792 aa26.1■■□□□ 1.77
SMCO4-201ENST00000298966 TNFAIP1Q13829 316 aa26.1■■□□□ 1.77
SMCO4-201ENST00000298966 ZBTB40Q9NUA8 1239 aa26.1■■□□□ 1.77
SMCO4-201ENST00000298966 ZBTB7BO15156 539 aaPredicted RBP26.09■■□□□ 1.77
SMCO4-201ENST00000298966 SLC9C1Q4G0N8 1177 aa26.09■■□□□ 1.77
SMCO4-201ENST00000298966 ZFYVE28Q9HCC9 887 aa26.09■■□□□ 1.77
SMCO4-201ENST00000298966 JAG2Q9Y219 1238 aa26.09■■□□□ 1.77
SMCO4-201ENST00000298966 AOX1Q06278 1338 aa26.09■■□□□ 1.77
SMCO4-201ENST00000298966 CAP1Q01518 475 aa26.08■■□□□ 1.77
SMCO4-201ENST00000298966 IFIT5Q13325 482 aaKnown RBP26.08■■□□□ 1.77
SMCO4-201ENST00000298966 TAF1CQ15572 869 aaPredicted RBP26.08■■□□□ 1.77
SMCO4-201ENST00000298966 DNAAF4Q8WXU2 420 aa26.08■■□□□ 1.77
SMCO4-201ENST00000298966 SLC4A8Q2Y0W8 1093 aa26.07■■□□□ 1.76
SMCO4-201ENST00000298966 LINS1Q8NG48 757 aa26.07■■□□□ 1.76
SMCO4-201ENST00000298966 MS4A4AQ96JQ5 239 aa26.07■■□□□ 1.76
SMCO4-201ENST00000298966 PTCH2Q9Y6C5 1203 aa26.07■■□□□ 1.76
SMCO4-201ENST00000298966 CENPQQ7L2Z9 268 aaPredicted RBP26.06■■□□□ 1.76
SMCO4-201ENST00000298966 COLQQ9Y215 455 aaPredicted RBP26.06■■□□□ 1.76
SMCO4-201ENST00000298966 CHMP3Q9Y3E7 222 aa26.06■■□□□ 1.76
SMCO4-201ENST00000298966 TRIOBPQ9H2D6 2365 aa26.06■■□□□ 1.76
SMCO4-201ENST00000298966 CCL15-CCL14A0A0B4J2E2 113 aa26.05■■□□□ 1.76
SMCO4-201ENST00000298966 GTF2A2P52657 109 aa26.05■■□□□ 1.76
SMCO4-201ENST00000298966 CCL15Q16663 113 aa26.05■■□□□ 1.76
SMCO4-201ENST00000298966 SPDYE2Q495Y8 402 aa26.05■■□□□ 1.76
SMCO4-201ENST00000298966 SLC4A10Q6U841 1118 aa26.05■■□□□ 1.76
SMCO4-201ENST00000298966 BRI3BPQ8WY22 251 aa26.05■■□□□ 1.76
SMCO4-201ENST00000298966 ZNF70Q9UC06 446 aaPredicted RBP26.05■■□□□ 1.76
SMCO4-201ENST00000298966 F6X3S4 739 aa26.04■■□□□ 1.76
SMCO4-201ENST00000298966 WDHD1O75717 1129 aaPredicted RBP26.04■■□□□ 1.76
SMCO4-201ENST00000298966 ALDH1L1O75891 902 aa26.04■■□□□ 1.76
SMCO4-201ENST00000298966 HDAC5Q9UQL6 1122 aa26.04■■□□□ 1.76
SMCO4-201ENST00000298966 GNAI3P08754 354 aa26.03■■□□□ 1.76
SMCO4-201ENST00000298966 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.03■■□□□ 1.76
SMCO4-201ENST00000298966 SRCIN1Q9C0H9 1055 aa26.03■■□□□ 1.76
SMCO4-201ENST00000298966 RWDD1Q9H446 243 aaPredicted RBP26.03■■□□□ 1.76
SMCO4-201ENST00000298966 TDRD3Q9H7E2 651 aaKnown RBP26.03■■□□□ 1.76
SMCO4-201ENST00000298966 FAM205AQ6ZU69 1335 aa26.03■■□□□ 1.76
SMCO4-201ENST00000298966 MAP3K9P80192 1104 aa26.02■■□□□ 1.76
SMCO4-201ENST00000298966 CNKSR2Q8WXI2 1034 aa26.02■■□□□ 1.76
SMCO4-201ENST00000298966 SERPINA10Q9UK55 444 aa26.02■■□□□ 1.76
SMCO4-201ENST00000298966 TTF2Q9UNY4 1162 aaKnown RBP26.02■■□□□ 1.76
SMCO4-201ENST00000298966 CSADQ9Y600 493 aa26.02■■□□□ 1.76
SMCO4-201ENST00000298966 TNNI2P48788 182 aa26.01■■□□□ 1.75
SMCO4-201ENST00000298966 FOXO4P98177 505 aa26.01■■□□□ 1.75
SMCO4-201ENST00000298966 VGLL4Q14135 290 aa26.01■■□□□ 1.75
SMCO4-201ENST00000298966 TAF7LQ5H9L4 462 aa26.01■■□□□ 1.75
SMCO4-201ENST00000298966 MFSD14BQ5SR56 506 aa26.01■■□□□ 1.75
SMCO4-201ENST00000298966 MYCP01106 439 aaPredicted RBP26■■□□□ 1.75
SMCO4-201ENST00000298966 HDAC1Q13547 482 aaPredicted RBP26■■□□□ 1.75
SMCO4-201ENST00000298966 KIF22Q14807 665 aa26■■□□□ 1.75
SMCO4-201ENST00000298966 FAM43AQ8N2R8 423 aa26■■□□□ 1.75
SMCO4-201ENST00000298966 OTUD5Q96G74 571 aa26■■□□□ 1.75
SMCO4-201ENST00000298966 TEPSINQ96N21 525 aa26■■□□□ 1.75
SMCO4-201ENST00000298966 CNNM1Q9NRU3 951 aa26■■□□□ 1.75
SMCO4-201ENST00000298966 TCP10L2B9ZVM9 353 aa25.99■■□□□ 1.75
SMCO4-201ENST00000298966 CCDC57Q2TAC2 916 aa25.99■■□□□ 1.75
SMCO4-201ENST00000298966 BEND3Q5T5X7 828 aa25.99■■□□□ 1.75
SMCO4-201ENST00000298966 LDHAL6AQ6ZMR3 332 aa25.99■■□□□ 1.75
SMCO4-201ENST00000298966 CDAN1Q8IWY9 1227 aa25.99■■□□□ 1.75
SMCO4-201ENST00000298966 ARAP2Q8WZ64 1704 aa25.99■■□□□ 1.75
SMCO4-201ENST00000298966 BRCA2P51587 3418 aa25.99■■□□□ 1.75
SMCO4-201ENST00000298966 H0YGN5 161 aa25.98■■□□□ 1.75
SMCO4-201ENST00000298966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.98■■□□□ 1.75
SMCO4-201ENST00000298966 TMEM39BQ9GZU3 492 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms