RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 PLIN2Q99541 437 aa19.58■□□□□ 0.72
CDCP1-201ENST00000296129 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
CDCP1-201ENST00000296129 GNA11P29992 359 aa19.57■□□□□ 0.72
CDCP1-201ENST00000296129 DNAJC10Q8IXB1 793 aa19.57■□□□□ 0.72
CDCP1-201ENST00000296129 TEX11Q8IYF3 940 aa19.57■□□□□ 0.72
CDCP1-201ENST00000296129 APPBP2Q92624 585 aa19.57■□□□□ 0.72
CDCP1-201ENST00000296129 GPAA1O43292 621 aa19.57■□□□□ 0.72
CDCP1-201ENST00000296129 PRDM10Q9NQV6 1147 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 KRT13P13646 458 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 DTHD1Q6ZMT9 781 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 CCDC172P0C7W6 258 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 PTGS1P23219 599 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 PRIMPOLQ96LW4 560 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 A0A1B0GVL5 298 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 ZNF174Q15697 407 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 IFI16Q16666 785 aaKnown RBP19.56■□□□□ 0.72
CDCP1-201ENST00000296129 NCOA5Q9HCD5 579 aaKnown RBP19.56■□□□□ 0.72
CDCP1-201ENST00000296129 ABCA8O94911 1581 aa19.56■□□□□ 0.72
CDCP1-201ENST00000296129 MBD5Q9P267 1494 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 TMEM87BQ96K49 555 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 TAOK3Q9H2K8 898 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 TTC12Q9H892 705 aaPredicted RBP19.55■□□□□ 0.72
CDCP1-201ENST00000296129 DNAI1Q9UI46 699 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 KAT6BQ8WYB5 2073 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 KCNQ3O43525 872 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 PLS1Q14651 629 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 MAP2K1Q02750 393 aaPredicted RBP19.55■□□□□ 0.72
CDCP1-201ENST00000296129 KIF24Q5T7B8 1368 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 GCOM1H8Y6P7 765 aaPredicted RBP19.55■□□□□ 0.72
CDCP1-201ENST00000296129 MYZAPP0CAP1 466 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 FAM98CQ17RN3 349 aaKnown RBP19.55■□□□□ 0.72
CDCP1-201ENST00000296129 TTC6Q86TZ1 520 aa19.55■□□□□ 0.72
CDCP1-201ENST00000296129 MAGI2Q86UL8 1455 aa19.54■□□□□ 0.72
CDCP1-201ENST00000296129 KBTBD3Q8NAB2 608 aa19.54■□□□□ 0.72
CDCP1-201ENST00000296129 DRC1Q96MC2 740 aa19.54■□□□□ 0.72
CDCP1-201ENST00000296129 ABCC4O15439 1325 aa19.54■□□□□ 0.72
CDCP1-201ENST00000296129 VWA3AA6NCI4 1184 aa19.54■□□□□ 0.72
CDCP1-201ENST00000296129 NEURL1BA8MQ27 555 aa19.54■□□□□ 0.72
CDCP1-201ENST00000296129 FAM135BQ49AJ0 1406 aa19.54■□□□□ 0.72
CDCP1-201ENST00000296129 LPIN2Q92539 896 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 ATL3Q6DD88 541 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 HOOK3Q86VS8 718 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 PLCD4Q9BRC7 762 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 SPATA31E1Q6ZUB1 1445 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 ELP1O95163 1332 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 CTDSPL2Q05D32 466 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 CTR9Q6PD62 1173 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 CCDC91Q7Z6B0 441 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 IFNKQ9P0W0 207 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 BICDL2A1A5D9 508 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 UBXN1Q04323 297 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 JDP2Q8WYK2 163 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 FAM13AO94988 1023 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 DEXIO95424 95 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 IL17REQ8NFR9 667 aa19.53■□□□□ 0.72
CDCP1-201ENST00000296129 RNF216Q9NWF9 866 aaPredicted RBP19.53■□□□□ 0.72
CDCP1-201ENST00000296129 SPECC1Q5M775 1068 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 GPCPD1Q9NPB8 672 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 AATFQ9NY61 560 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDCP1-201ENST00000296129 GGA1Q9UJY5 639 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 ZAP70P43403 619 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 USP37Q86T82 979 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 CCDC24Q8N4L8 307 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 SPATA5Q8NB90 893 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 SLAIN2Q9P270 581 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 ANGEL1Q9UNK9 670 aaKnown RBP19.52■□□□□ 0.72
CDCP1-201ENST00000296129 ZKSCAN5Q9Y2L8 839 aa19.52■□□□□ 0.72
CDCP1-201ENST00000296129 MAATS1Q7Z4T9 603 aa19.52■□□□□ 0.71
CDCP1-201ENST00000296129 KDM5CP41229 1560 aa19.52■□□□□ 0.71
CDCP1-201ENST00000296129 IQUBQ8NA54 791 aa19.52■□□□□ 0.71
CDCP1-201ENST00000296129 UGGT1Q9NYU2 1555 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 ARID5AQ03989 594 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 CKAP4Q07065 602 aaKnown RBP19.51■□□□□ 0.71
CDCP1-201ENST00000296129 LETM2Q2VYF4 491 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 LLPHQ9BRT6 129 aaKnown RBP19.51■□□□□ 0.71
CDCP1-201ENST00000296129 PRDM1O75626 825 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 FAM160A1Q05DH4 1040 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 KDRP35968 1356 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 MROH5Q6ZUA9 1318 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 DYNC1I1O14576 645 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 POLD1P28340 1107 aa19.51■□□□□ 0.71
CDCP1-201ENST00000296129 PHACTR2O75167 634 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 CCDC175P0C221 793 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 PHKG2P15735 406 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 EIF6P56537 245 aaKnown RBP19.5■□□□□ 0.71
CDCP1-201ENST00000296129 ZBTB21Q9ULJ3 1066 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 MRVI1Q9Y6F6 885 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 ERVV-2B6SEH9 535 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 SYNMO15061 1565 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 TTC37Q6PGP7 1564 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 GIGYF1O75420 1035 aaPredicted RBP19.5■□□□□ 0.71
CDCP1-201ENST00000296129 ERVK-7P63135 1459 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 ZNF532Q9HCE3 1301 aa19.5■□□□□ 0.71
CDCP1-201ENST00000296129 PIK3AP1Q6ZUJ8 805 aa19.49■□□□□ 0.71
CDCP1-201ENST00000296129 CTAGE15A4D2H0 777 aa19.49■□□□□ 0.71
CDCP1-201ENST00000296129 SPDYE4A6NLX3 237 aa19.49■□□□□ 0.71
CDCP1-201ENST00000296129 CTAGE8P0CG41 777 aa19.49■□□□□ 0.71
CDCP1-201ENST00000296129 ANO1Q5XXA6 986 aa19.49■□□□□ 0.71
CDCP1-201ENST00000296129 CTAGE6Q86UF2 777 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms