RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 LCORLQ8N3X6 602 aa27.18■■□□□ 1.94
PTX3-201ENST00000295927 MIGA1Q8NAN2 632 aa27.18■■□□□ 1.94
PTX3-201ENST00000295927 ZNF622Q969S3 477 aaKnown RBP eCLIP27.18■■□□□ 1.94
PTX3-201ENST00000295927 INTS4Q96HW7 963 aaKnown RBP27.18■■□□□ 1.94
PTX3-201ENST00000295927 HAND2P61296 217 aa27.17■■□□□ 1.94
PTX3-201ENST00000295927 ZNF384Q8TF68 577 aa27.17■■□□□ 1.94
PTX3-201ENST00000295927 JAG2Q9Y219 1238 aa27.17■■□□□ 1.94
PTX3-201ENST00000295927 PATL2C9JE40 543 aaKnown RBP27.16■■□□□ 1.94
PTX3-201ENST00000295927 H0YIN7 160 aa27.16■■□□□ 1.94
PTX3-201ENST00000295927 C6orf229H3BNL8 230 aa27.16■■□□□ 1.94
PTX3-201ENST00000295927 HMGB1P09429 215 aaKnown RBP27.16■■□□□ 1.94
PTX3-201ENST00000295927 CCDC125Q86Z20 511 aa27.16■■□□□ 1.94
PTX3-201ENST00000295927 MAST2Q6P0Q8 1798 aa27.16■■□□□ 1.94
PTX3-201ENST00000295927 ANKRD1Q15327 319 aa27.16■■□□□ 1.94
PTX3-201ENST00000295927 NAA16Q6N069 864 aaPredicted RBP27.16■■□□□ 1.94
PTX3-201ENST00000295927 ZNF213O14771 459 aa27.15■■□□□ 1.94
PTX3-201ENST00000295927 ALX1Q15699 326 aa27.15■■□□□ 1.94
PTX3-201ENST00000295927 NSUN4Q96CB9 384 aaKnown RBP27.15■■□□□ 1.94
PTX3-201ENST00000295927 ZSCAN31Q96LW9 406 aaPredicted RBP27.15■■□□□ 1.94
PTX3-201ENST00000295927 CD209Q9NNX6 404 aa27.15■■□□□ 1.94
PTX3-201ENST00000295927 LARGE1O95461 756 aa27.14■■□□□ 1.94
PTX3-201ENST00000295927 GNAT2P19087 354 aa27.14■■□□□ 1.94
PTX3-201ENST00000295927 PRDX5P30044 214 aa27.14■■□□□ 1.94
PTX3-201ENST00000295927 MECOMQ03112 1051 aa27.14■■□□□ 1.94
PTX3-201ENST00000295927 TOB2Q14106 344 aaPredicted RBP27.14■■□□□ 1.94
PTX3-201ENST00000295927 STYK1Q6J9G0 422 aa27.14■■□□□ 1.94
PTX3-201ENST00000295927 OLFM4Q6UX06 510 aa27.14■■□□□ 1.94
PTX3-201ENST00000295927 WDR66Q8TBY9 1149 aa27.14■■□□□ 1.94
PTX3-201ENST00000295927 SALL1Q9NSC2 1324 aa27.14■■□□□ 1.93
PTX3-201ENST00000295927 MAGEB6P1A0A0J9YX57 407 aa27.14■■□□□ 1.93
PTX3-201ENST00000295927 IFNL3Q8IZI9 196 aa27.14■■□□□ 1.93
PTX3-201ENST00000295927 EPB41L4AQ9HCS5 686 aaPredicted RBP27.14■■□□□ 1.93
PTX3-201ENST00000295927 ZMYM6O95789 1325 aa27.13■■□□□ 1.93
PTX3-201ENST00000295927 DUOX1Q9NRD9 1551 aa27.13■■□□□ 1.93
PTX3-201ENST00000295927 GSG1L2A8MUP6 293 aa27.13■■□□□ 1.93
PTX3-201ENST00000295927 PRKAB2O43741 272 aa27.13■■□□□ 1.93
PTX3-201ENST00000295927 IL1R1P14778 569 aa27.13■■□□□ 1.93
PTX3-201ENST00000295927 DHX32Q7L7V1 743 aaKnown RBP27.13■■□□□ 1.93
PTX3-201ENST00000295927 MPNDQ8N594 471 aa27.13■■□□□ 1.93
PTX3-201ENST00000295927 TPCN1Q9ULQ1 816 aa27.13■■□□□ 1.93
PTX3-201ENST00000295927 SLC4A4Q9Y6R1 1079 aa27.13■■□□□ 1.93
PTX3-201ENST00000295927 SPTY2D1Q68D10 685 aaPredicted RBP27.12■■□□□ 1.93
PTX3-201ENST00000295927 SH2B1Q9NRF2 756 aaPredicted RBP27.12■■□□□ 1.93
PTX3-201ENST00000295927 CHRNA5P30532 468 aa27.12■■□□□ 1.93
PTX3-201ENST00000295927 RAB3GAP1Q15042 981 aa27.12■■□□□ 1.93
PTX3-201ENST00000295927 RIOK1Q9BRS2 568 aaKnown RBP27.12■■□□□ 1.93
PTX3-201ENST00000295927 KIAA1551Q9HCM1 1747 aa27.11■■□□□ 1.93
PTX3-201ENST00000295927 SLX4Q8IY92 1834 aa27.11■■□□□ 1.93
PTX3-201ENST00000295927 ME3Q16798 604 aa27.11■■□□□ 1.93
PTX3-201ENST00000295927 Q6ZUG5 572 aa27.11■■□□□ 1.93
PTX3-201ENST00000295927 SLC16A10Q8TF71 515 aa27.11■■□□□ 1.93
PTX3-201ENST00000295927 TMX4Q9H1E5 349 aaPredicted RBP27.11■■□□□ 1.93
PTX3-201ENST00000295927 EXOSC10Q01780 885 aaKnown RBP27.1■■□□□ 1.93
PTX3-201ENST00000295927 NBPF3Q9H094 633 aa27.1■■□□□ 1.93
PTX3-201ENST00000295927 NAPBQ9H115 298 aa27.1■■□□□ 1.93
PTX3-201ENST00000295927 DPP8Q6V1X1 898 aaPredicted RBP27.1■■□□□ 1.93
PTX3-201ENST00000295927 DYNLL1P63167 89 aaKnown RBP27.09■■□□□ 1.93
PTX3-201ENST00000295927 TMED8Q6PL24 325 aaPredicted RBP27.09■■□□□ 1.93
PTX3-201ENST00000295927 LRRC2Q9BYS8 371 aa27.09■■□□□ 1.93
PTX3-201ENST00000295927 NACAP1Q9BZK3 213 aa27.09■■□□□ 1.93
PTX3-201ENST00000295927 CHD4Q14839 1912 aa27.08■■□□□ 1.93
PTX3-201ENST00000295927 RIMBP2O15034 1052 aa27.08■■□□□ 1.93
PTX3-201ENST00000295927 LDHBP07195 334 aaKnown RBP27.08■■□□□ 1.93
PTX3-201ENST00000295927 NUCB2P80303 420 aa27.08■■□□□ 1.93
PTX3-201ENST00000295927 DZIP1Q86YF9 867 aaKnown RBP27.08■■□□□ 1.93
PTX3-201ENST00000295927 CCDC83Q8IWF9 413 aa27.08■■□□□ 1.93
PTX3-201ENST00000295927 IGSF3O75054 1194 aa27.07■■□□□ 1.92
PTX3-201ENST00000295927 TBC1D10CQ8IV04 446 aa27.07■■□□□ 1.92
PTX3-201ENST00000295927 TNPO1Q92973 898 aaKnown RBP27.07■■□□□ 1.92
PTX3-201ENST00000295927 CNKSR1Q969H4 720 aa27.07■■□□□ 1.92
PTX3-201ENST00000295927 C10orf71Q711Q0 1435 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 TDO2P48775 406 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 ST3GAL1Q11201 340 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 NCOA7Q8NI08 942 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 ZC3H12CQ9C0D7 883 aaKnown RBP27.06■■□□□ 1.92
PTX3-201ENST00000295927 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.06■■□□□ 1.92
PTX3-201ENST00000295927 FGD1P98174 961 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 PKP1Q13835 747 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 GRIK5Q16478 980 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 MB21D2Q8IYB1 491 aaPredicted RBP27.06■■□□□ 1.92
PTX3-201ENST00000295927 NECAB1Q8N987 351 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 SDR42E1Q8WUS8 393 aa27.06■■□□□ 1.92
PTX3-201ENST00000295927 CHST3Q7LGC8 479 aa27.05■■□□□ 1.92
PTX3-201ENST00000295927 BRF1Q92994 677 aa27.05■■□□□ 1.92
PTX3-201ENST00000295927 AGXT2Q9BYV1 514 aa27.05■■□□□ 1.92
PTX3-201ENST00000295927 COA1Q9GZY4 146 aa27.05■■□□□ 1.92
PTX3-201ENST00000295927 RALYLQ86SE5 291 aaKnown RBP27.04■■□□□ 1.92
PTX3-201ENST00000295927 TIAM2Q8IVF5 1701 aa27.04■■□□□ 1.92
PTX3-201ENST00000295927 DLEC1Q9Y238 1755 aa27.04■■□□□ 1.92
PTX3-201ENST00000295927 AATFQ9NY61 560 aaKnown RBP eCLIP27.04■■□□□ 1.92
PTX3-201ENST00000295927 MCM5P33992 734 aa27.03■■□□□ 1.92
PTX3-201ENST00000295927 TRDNQ13061 729 aa27.03■■□□□ 1.92
PTX3-201ENST00000295927 BAZ2AQ9UIF9 1905 aaKnown RBP27.03■■□□□ 1.92
PTX3-201ENST00000295927 MYH2Q9UKX2 1941 aa27.03■■□□□ 1.92
PTX3-201ENST00000295927 FAM205AQ6ZU69 1335 aa27.02■■□□□ 1.92
PTX3-201ENST00000295927 GSTO1P78417 241 aa27.02■■□□□ 1.92
PTX3-201ENST00000295927 CTDSPL2Q05D32 466 aa27.02■■□□□ 1.92
PTX3-201ENST00000295927 ILDR1Q86SU0 546 aaPredicted RBP27.02■■□□□ 1.92
PTX3-201ENST00000295927 ZNF219Q9P2Y4 722 aaPredicted RBP27.02■■□□□ 1.92
PTX3-201ENST00000295927 SMC3Q9UQE7 1217 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms