RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CTSWP56202 376 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 PRPF40BQ6NWY9 871 aaKnown RBP13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 SH2B1Q9NRF2 756 aaPredicted RBP13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 G2E3Q7L622 706 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 PLEKHF1Q96S99 279 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 KDRP35968 1356 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 CNPY2Q9Y2B0 182 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 PPLO60437 1756 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 ERLIN2O94905 339 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 MMP10P09238 476 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 GRM1Q13255 1194 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 TTLL7Q6ZT98 887 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 MICALCLQ6ZW33 695 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 ATG3Q9NT62 314 aa13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 SEC63Q9UGP8 760 aaKnown RBP13.05□□□□□ -0.32
NPC1L1-201ENST00000289547 RANBP6O60518 1105 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 KIAA1328Q86T90 577 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 NEURL1BA8MQ27 555 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 BEGAINQ9BUH8 593 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 PPEF1O14829 653 aaPredicted RBP13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 GNAT2P19087 354 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 STX1AQ16623 288 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 ANO6Q4KMQ2 910 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 WDR78Q5VTH9 848 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 PIBF1Q8WXW3 757 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 WASF1Q92558 559 aa13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-201ENST00000289547 BBOX1O75936 387 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 CAVIN2O95810 425 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 GJB2P29033 226 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 TNIP1Q15025 636 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 UBR1Q8IWV7 1749 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 EPS15P42566 896 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 KCNQ4P56696 695 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 NUCB1Q02818 461 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 GRIPAP1Q4V328 841 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 CCDC196A0A1B0GTZ2 297 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 BIN1O00499 593 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 NPR1P16066 1061 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 MCM3P25205 808 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 CCDC12Q8WUD4 166 aaPredicted RBP13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 LPIN2Q92539 896 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
NPC1L1-201ENST00000289547 ZSCAN22P10073 491 aaPredicted RBP13.02□□□□□ -0.32
NPC1L1-201ENST00000289547 TRAF1Q13077 416 aa13.02□□□□□ -0.32
NPC1L1-201ENST00000289547 PICALMQ13492 652 aa13.02□□□□□ -0.32
NPC1L1-201ENST00000289547 CTCFLQ8NI51 663 aaPredicted RBP13.02□□□□□ -0.32
NPC1L1-201ENST00000289547 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.32
NPC1L1-201ENST00000289547 ZBTB7AO95365 584 aa13.02□□□□□ -0.32
NPC1L1-201ENST00000289547 TFCP2Q12800 502 aa13.02□□□□□ -0.32
NPC1L1-201ENST00000289547 TTLL6Q8N841 843 aa13.02□□□□□ -0.32
NPC1L1-201ENST00000289547 RTKN2Q8IZC4 609 aa13.02□□□□□ -0.33
NPC1L1-201ENST00000289547 FSIP1Q8NA03 581 aa13.02□□□□□ -0.33
NPC1L1-201ENST00000289547 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
NPC1L1-201ENST00000289547 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.33
NPC1L1-201ENST00000289547 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.33
NPC1L1-201ENST00000289547 KRBA2Q6ZNG9 492 aa13.02□□□□□ -0.33
NPC1L1-201ENST00000289547 CCDC150Q8NCX0 1101 aa13.02□□□□□ -0.33
NPC1L1-201ENST00000289547 BCL2L12Q9HB09 334 aa13.02□□□□□ -0.33
NPC1L1-201ENST00000289547 ZNF445P59923 1031 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 SLC16A10Q8TF71 515 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 TSPY2A6NKD2 308 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 LIG1P18858 919 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 TTC22Q5TAA0 569 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 GOLGA6L9A6NEM1 432 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 CUL5Q93034 780 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 MASTLQ96GX5 879 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 ADGRB1O14514 1584 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 KCNQ2O43526 872 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 TNFAIP1Q13829 316 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 RC3H1Q5TC82 1133 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 TTC6Q86TZ1 520 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 MARCH10Q8NA82 808 aaPredicted RBP13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 LUC7LQ9NQ29 371 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
NPC1L1-201ENST00000289547 R3HDM1Q15032 1099 aaKnown RBP13□□□□□ -0.33
NPC1L1-201ENST00000289547 WWC2Q6AWC2 1192 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 SLC4A4Q9Y6R1 1079 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 COL15A1P39059 1388 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 ZNF76P36508 570 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 DMTNQ08495 405 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 PAG1Q9NWQ8 432 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 KIF1AQ12756 1690 aa13□□□□□ -0.33
NPC1L1-201ENST00000289547 TXLNAP40222 546 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms