RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 ALDH1A1P00352 501 aa19.17■□□□□ 0.66
SOD1-201ENST00000270142 GJA5P36382 358 aa19.17■□□□□ 0.66
SOD1-201ENST00000270142 CAVIN4Q5BKX8 364 aa19.17■□□□□ 0.66
SOD1-201ENST00000270142 IFNL1Q8IU54 200 aa19.17■□□□□ 0.66
SOD1-201ENST00000270142 CDCA7LQ96GN5 454 aa19.17■□□□□ 0.66
SOD1-201ENST00000270142 TCP10L2B9ZVM9 353 aa19.16■□□□□ 0.66
SOD1-201ENST00000270142 IGF2BP3O00425 579 aaKnown RBP eCLIP19.16■□□□□ 0.66
SOD1-201ENST00000270142 INHBEP58166 350 aa19.16■□□□□ 0.66
SOD1-201ENST00000270142 ALDH1L2Q3SY69 923 aa19.16■□□□□ 0.66
SOD1-201ENST00000270142 ANKRD13AQ8IZ07 590 aa19.16■□□□□ 0.66
SOD1-201ENST00000270142 TEPSINQ96N21 525 aa19.16■□□□□ 0.66
SOD1-201ENST00000270142 LAMB1P07942 1786 aa19.15■□□□□ 0.66
SOD1-201ENST00000270142 FRAT2O75474 233 aaPredicted RBP19.15■□□□□ 0.66
SOD1-201ENST00000270142 RFX5P48382 616 aaPredicted RBP19.15■□□□□ 0.66
SOD1-201ENST00000270142 BCAMP50895 628 aa19.15■□□□□ 0.66
SOD1-201ENST00000270142 TBC1D22AQ8WUA7 517 aa19.15■□□□□ 0.66
SOD1-201ENST00000270142 OTOFQ9HC10 1997 aa19.14■□□□□ 0.65
SOD1-201ENST00000270142 FGFR2P21802 821 aa19.14■□□□□ 0.65
SOD1-201ENST00000270142 TMEM39BQ9GZU3 492 aa19.14■□□□□ 0.65
SOD1-201ENST00000270142 ELP3Q9H9T3 547 aa19.14■□□□□ 0.65
SOD1-201ENST00000270142 SMC4Q9NTJ3 1288 aa19.14■□□□□ 0.65
SOD1-201ENST00000270142 PUM3Q15397 648 aaKnown RBP19.13■□□□□ 0.65
SOD1-201ENST00000270142 FBXO46Q6PJ61 603 aaPredicted RBP19.13■□□□□ 0.65
SOD1-201ENST00000270142 KIF16BQ96L93 1317 aa19.13■□□□□ 0.65
SOD1-201ENST00000270142 EYA2O00167 538 aa19.12■□□□□ 0.65
SOD1-201ENST00000270142 IFIT1P09914 478 aaKnown RBP19.12■□□□□ 0.65
SOD1-201ENST00000270142 TNNI2P48788 182 aa19.12■□□□□ 0.65
SOD1-201ENST00000270142 CACNB3P54284 484 aa19.12■□□□□ 0.65
SOD1-201ENST00000270142 HDLBPQ00341 1268 aaKnown RBP19.12■□□□□ 0.65
SOD1-201ENST00000270142 TRMT2AQ8IZ69 625 aaKnown RBP19.12■□□□□ 0.65
SOD1-201ENST00000270142 TEKT1Q969V4 418 aa19.12■□□□□ 0.65
SOD1-201ENST00000270142 OPTNQ96CV9 577 aa19.12■□□□□ 0.65
SOD1-201ENST00000270142 TESPA1A2RU30 521 aaPredicted RBP19.11■□□□□ 0.65
SOD1-201ENST00000270142 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.11■□□□□ 0.65
SOD1-201ENST00000270142 PTPN18Q99952 460 aa19.11■□□□□ 0.65
SOD1-201ENST00000270142 CRHR2Q13324 411 aa19.1■□□□□ 0.65
SOD1-201ENST00000270142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■□□□□ 9.9
SOD1-201ENST00000270142 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
SOD1-201ENST00000270142 ZDHHC15Q96MV8 337 aa19.1■□□□□ 0.65
SOD1-201ENST00000270142 TRIM17Q9Y577 477 aa19.1■□□□□ 0.65
SOD1-201ENST00000270142 SLC5A1P13866 664 aa19.09■□□□□ 0.65
SOD1-201ENST00000270142 VGLL4Q14135 290 aa19.09■□□□□ 0.65
SOD1-201ENST00000270142 OTUD7BQ6GQQ9 843 aa19.09■□□□□ 0.65
SOD1-201ENST00000270142 APOBEC3HQ6NTF7 200 aaKnown RBP19.09■□□□□ 0.65
SOD1-201ENST00000270142 ATG9AQ7Z3C6 839 aa19.09■□□□□ 0.65
SOD1-201ENST00000270142 LPIN2Q92539 896 aa19.09■□□□□ 0.65
SOD1-201ENST00000270142 MS4A4AQ96JQ5 239 aa19.09■□□□□ 0.65
SOD1-201ENST00000270142 SUGT1Q9Y2Z0 365 aa19.09■□□□□ 0.65
SOD1-201ENST00000270142 MAST3O60307 1309 aa19.08■□□□□ 0.65
SOD1-201ENST00000270142 UBTFL1P0CB47 393 aaPredicted RBP19.08■□□□□ 0.64
SOD1-201ENST00000270142 MAP3K9P80192 1104 aa19.08■□□□□ 0.64
SOD1-201ENST00000270142 OTOP1Q7RTM1 612 aa19.08■□□□□ 0.64
SOD1-201ENST00000270142 MRIQ9BWK5 157 aa19.08■□□□□ 0.64
SOD1-201ENST00000270142 SIL1Q9H173 461 aa19.08■□□□□ 0.64
SOD1-201ENST00000270142 NOB1Q9ULX3 412 aaKnown RBP19.08■□□□□ 0.64
SOD1-201ENST00000270142 BRI3BPQ8WY22 251 aa19.07■□□□□ 0.64
SOD1-201ENST00000270142 TMOD2Q9NZR1 351 aa19.07■□□□□ 0.64
SOD1-201ENST00000270142 CT47B1P0C2W7 299 aaPredicted RBP19.06■□□□□ 0.64
SOD1-201ENST00000270142 HHIPL2Q6UWX4 724 aa19.06■□□□□ 0.64
SOD1-201ENST00000270142 FAM83AQ86UY5 434 aa19.06■□□□□ 0.64
SOD1-201ENST00000270142 CD99L2Q8TCZ2 262 aa19.06■□□□□ 0.64
SOD1-201ENST00000270142 ERO1AQ96HE7 468 aa19.06■□□□□ 0.64
SOD1-201ENST00000270142 CSADQ9Y600 493 aa19.06■□□□□ 0.64
SOD1-201ENST00000270142 TNRC18O15417 2968 aaPredicted RBP19.06■□□□□ 0.64
SOD1-201ENST00000270142 CIAO1O76071 339 aa19.05■□□□□ 0.64
SOD1-201ENST00000270142 SLC34A2O95436 690 aa19.05■□□□□ 0.64
SOD1-201ENST00000270142 WDR66Q8TBY9 1149 aa19.05■□□□□ 0.64
SOD1-201ENST00000270142 OTUD5Q96G74 571 aa19.05■□□□□ 0.64
SOD1-201ENST00000270142 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
SOD1-201ENST00000270142 FBXO3Q9UK99 471 aa19.05■□□□□ 0.64
SOD1-201ENST00000270142 LRRFIP2Q9Y608 721 aaKnown RBP19.05■□□□□ 0.64
SOD1-201ENST00000270142 RPAP1Q9BWH6 1393 aaPredicted RBP19.05■□□□□ 0.64
SOD1-201ENST00000270142 CCL15-CCL14A0A0B4J2E2 113 aa19.04■□□□□ 0.64
SOD1-201ENST00000270142 GTF2A2P52657 109 aa19.04■□□□□ 0.64
SOD1-201ENST00000270142 CAP1Q01518 475 aa19.04■□□□□ 0.64
SOD1-201ENST00000270142 CCL15Q16663 113 aa19.04■□□□□ 0.64
SOD1-201ENST00000270142 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
SOD1-201ENST00000270142 FKBP1CQ5VVH2 108 aa19.04■□□□□ 0.64
SOD1-201ENST00000270142 WRNIP1Q96S55 665 aa19.04■□□□□ 0.64
SOD1-201ENST00000270142 PA2G4Q9UQ80 394 aaKnown RBP19.04■□□□□ 0.64
SOD1-201ENST00000270142 SNCAIPQ9Y6H5 919 aa19.04■□□□□ 0.64
SOD1-201ENST00000270142 HTTP42858 3142 aa19.03■□□□□ 0.64
SOD1-201ENST00000270142 SPDYE5A6NIY4 337 aa19.03■□□□□ 0.64
SOD1-201ENST00000270142 PRDX5P30044 214 aa19.03■□□□□ 0.64
SOD1-201ENST00000270142 SP3Q02447 781 aa19.03■□□□□ 0.64
SOD1-201ENST00000270142 FAM43AQ8N2R8 423 aa19.03■□□□□ 0.64
SOD1-201ENST00000270142 MEIS3Q99687 375 aa19.03■□□□□ 0.64
SOD1-201ENST00000270142 CEP126Q9P2H0 1117 aa19.03■□□□□ 0.64
SOD1-201ENST00000270142 DAGLAQ9Y4D2 1042 aa19.03■□□□□ 0.64
SOD1-201ENST00000270142 MYH13Q9UKX3 1938 aa19.02■□□□□ 0.64
SOD1-201ENST00000270142 TAF1CQ15572 869 aaPredicted RBP19.02■□□□□ 0.64
SOD1-201ENST00000270142 DIXDC1Q155Q3 683 aa19.02■□□□□ 0.64
SOD1-201ENST00000270142 ZKSCAN4Q969J2 545 aaPredicted RBP19.02■□□□□ 0.64
SOD1-201ENST00000270142 PTPN22Q9Y2R2 807 aa19.02■□□□□ 0.64
SOD1-201ENST00000270142 IL15P40933 162 aaPredicted RBP19.01■□□□□ 0.63
SOD1-201ENST00000270142 PHKA1P46020 1223 aa19.01■□□□□ 0.63
SOD1-201ENST00000270142 RARSP54136 660 aaKnown RBP19.01■□□□□ 0.63
SOD1-201ENST00000270142 CDC42EP5Q6NZY7 148 aa19.01■□□□□ 0.63
SOD1-201ENST00000270142 ERO1BQ86YB8 467 aa19.01■□□□□ 0.63
SOD1-201ENST00000270142 HOOK2Q96ED9 719 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms