RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 HAND2P61296 217 aa24.39■■□□□ 1.5
LYSMD2-201ENST00000267838 ARMT1Q9H993 441 aa24.39■■□□□ 1.5
LYSMD2-201ENST00000267838 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.39■■□□□ 1.5
LYSMD2-201ENST00000267838 CACNA1SQ13698 1873 aa24.39■■□□□ 1.5
LYSMD2-201ENST00000267838 PATL2C9JE40 543 aaKnown RBP24.39■■□□□ 1.49
LYSMD2-201ENST00000267838 ZNF213O14771 459 aa24.39■■□□□ 1.49
LYSMD2-201ENST00000267838 PDE6BP35913 854 aa24.39■■□□□ 1.49
LYSMD2-201ENST00000267838 PKP1Q13835 747 aa24.39■■□□□ 1.49
LYSMD2-201ENST00000267838 Q6ZUG5 572 aa24.39■■□□□ 1.49
LYSMD2-201ENST00000267838 SRGNP10124 158 aa24.38■■□□□ 1.49
LYSMD2-201ENST00000267838 NPR1P16066 1061 aa24.38■■□□□ 1.49
LYSMD2-201ENST00000267838 ALX1Q15699 326 aa24.38■■□□□ 1.49
LYSMD2-201ENST00000267838 PODXL2Q9NZ53 605 aa24.38■■□□□ 1.49
LYSMD2-201ENST00000267838 GGA1Q9UJY5 639 aa24.38■■□□□ 1.49
LYSMD2-201ENST00000267838 PPEF1O14829 653 aaPredicted RBP24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 UFL1O94874 794 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 GNAT2P19087 354 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 CHAF1AQ13111 956 aaPredicted RBP24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 SF3B2Q13435 895 aaKnown RBP24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 ZNF804AQ7Z570 1209 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 CCDC83Q8IWF9 413 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 LCORLQ8N3X6 602 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 ZMYM6O95789 1325 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 BAG6P46379 1132 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 EXOSC10Q01780 885 aaKnown RBP24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 ADGRA1Q86SQ6 560 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 SP8Q8IXZ3 490 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 MIGA1Q8NAN2 632 aa24.37■■□□□ 1.49
LYSMD2-201ENST00000267838 COL11A2P13942 1736 aaPredicted RBP24.36■■□□□ 1.49
LYSMD2-201ENST00000267838 TDRD7Q8NHU6 1098 aaKnown RBP24.36■■□□□ 1.49
LYSMD2-201ENST00000267838 GPR101Q96P66 508 aaPredicted RBP24.36■■□□□ 1.49
LYSMD2-201ENST00000267838 ST3GAL1Q11201 340 aa24.35■■□□□ 1.49
LYSMD2-201ENST00000267838 NAA16Q6N069 864 aaPredicted RBP24.35■■□□□ 1.49
LYSMD2-201ENST00000267838 IFNL3Q8IZI9 196 aa24.35■■□□□ 1.49
LYSMD2-201ENST00000267838 EPB41L4AQ9HCS5 686 aaPredicted RBP24.35■■□□□ 1.49
LYSMD2-201ENST00000267838 ZDHHC9Q9Y397 364 aa24.35■■□□□ 1.49
LYSMD2-201ENST00000267838 MAST2Q6P0Q8 1798 aa24.35■■□□□ 1.49
LYSMD2-201ENST00000267838 LTBP1Q14766 1721 aa24.35■■□□□ 1.49
LYSMD2-201ENST00000267838 GSG1L2A8MUP6 293 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 NECAB1Q8N987 351 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 LRRC2Q9BYS8 371 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 SMC3Q9UQE7 1217 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 SLC4A4Q9Y6R1 1079 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 MAGEB6P1A0A0J9YX57 407 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 ALDH1B1P30837 517 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 FGD1P98174 961 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 SKOR2Q2VWA4 1001 aaPredicted RBP24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 CLEC17AQ6ZS10 378 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 ZNF384Q8TF68 577 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 NSUN4Q96CB9 384 aaKnown RBP24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 NBPF3Q9H094 633 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 NAPBQ9H115 298 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 ATP6V0A2Q9Y487 856 aa24.34■■□□□ 1.49
LYSMD2-201ENST00000267838 CCDC88AQ3V6T2 1871 aa24.33■■□□□ 1.49
LYSMD2-201ENST00000267838 PRKAB2O43741 272 aa24.33■■□□□ 1.49
LYSMD2-201ENST00000267838 NCOA7Q8NI08 942 aa24.33■■□□□ 1.49
LYSMD2-201ENST00000267838 TBC1D16Q8TBP0 767 aa24.33■■□□□ 1.49
LYSMD2-201ENST00000267838 BRF1Q92994 677 aa24.33■■□□□ 1.49
LYSMD2-201ENST00000267838 MASTLQ96GX5 879 aa24.33■■□□□ 1.49
LYSMD2-201ENST00000267838 AGXT2Q9BYV1 514 aa24.33■■□□□ 1.49
LYSMD2-201ENST00000267838 SALL1Q9NSC2 1324 aa24.32■■□□□ 1.48
LYSMD2-201ENST00000267838 MECOMQ03112 1051 aa24.32■■□□□ 1.48
LYSMD2-201ENST00000267838 WDR66Q8TBY9 1149 aa24.32■■□□□ 1.48
LYSMD2-201ENST00000267838 NACAP1Q9BZK3 213 aa24.32■■□□□ 1.48
LYSMD2-201ENST00000267838 POLLQ9UGP5 575 aa24.32■■□□□ 1.48
LYSMD2-201ENST00000267838 SPTY2D1Q68D10 685 aaPredicted RBP24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 TMED8Q6PL24 325 aaPredicted RBP24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 DEFB132Q7Z7B7 95 aa24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 MB21D2Q8IYB1 491 aaPredicted RBP24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 RIOK1Q9BRS2 568 aaKnown RBP24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 JAG2Q9Y219 1238 aa24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 BRD1O95696 1058 aa24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 PRDX5P30044 214 aa24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 MRE11P49959 708 aa24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 RALYLQ86SE5 291 aaKnown RBP24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 TBC1D10CQ8IV04 446 aa24.31■■□□□ 1.48
LYSMD2-201ENST00000267838 CHST3Q7LGC8 479 aa24.3■■□□□ 1.48
LYSMD2-201ENST00000267838 FBXL16Q8N461 479 aa24.3■■□□□ 1.48
LYSMD2-201ENST00000267838 CD209Q9NNX6 404 aa24.3■■□□□ 1.48
LYSMD2-201ENST00000267838 C6orf229H3BNL8 230 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 IGSF3O75054 1194 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 MCM5P33992 734 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 TDO2P48775 406 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 TRDNQ13061 729 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 STK3Q13188 491 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 KIAA1551Q9HCM1 1747 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 BAG4O95429 457 aaKnown RBP24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 IL1R1P14778 569 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 GJB2P29033 226 aa24.29■■□□□ 1.48
LYSMD2-201ENST00000267838 TIAM2Q8IVF5 1701 aa24.28■■□□□ 1.48
LYSMD2-201ENST00000267838 DYNLL1P63167 89 aaKnown RBP24.28■■□□□ 1.48
LYSMD2-201ENST00000267838 C2CD5Q86YS7 1000 aa24.28■■□□□ 1.48
LYSMD2-201ENST00000267838 GTF3C6Q969F1 213 aa24.28■■□□□ 1.48
LYSMD2-201ENST00000267838 CHD4Q14839 1912 aa24.28■■□□□ 1.48
LYSMD2-201ENST00000267838 WDR19Q8NEZ3 1342 aa24.28■■□□□ 1.48
LYSMD2-201ENST00000267838 PRC1O43663 620 aa24.27■■□□□ 1.48
LYSMD2-201ENST00000267838 XRCC6P12956 609 aaKnown RBP eCLIP24.27■■□□□ 1.48
LYSMD2-201ENST00000267838 APOBRQ0VD83 1088 aa24.27■■□□□ 1.48
LYSMD2-201ENST00000267838 DZIP1Q86YF9 867 aaKnown RBP24.27■■□□□ 1.48
LYSMD2-201ENST00000267838 DUOX1Q9NRD9 1551 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms