RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PCCAP05165 728 aaPredicted RBP17.59■□□□□ 0.41
TIMP3-201ENST00000266085 NEFHP12036 1026 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 TMEM87BQ96K49 555 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 CENPHQ9H3R5 247 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 ANGEL1Q9UNK9 670 aaKnown RBP17.59■□□□□ 0.41
TIMP3-201ENST00000266085 ZNF532Q9HCE3 1301 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 TBCAO75347 108 aaKnown RBP17.59■□□□□ 0.41
TIMP3-201ENST00000266085 UBASH3AP57075 661 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 RRAGBQ5VZM2 374 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 GBP3Q9H0R5 595 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 SHROOM2Q13796 1616 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 H0YHG0 523 aa17.58■□□□□ 0.41
TIMP3-201ENST00000266085 SPAG1Q07617 926 aa17.58■□□□□ 0.41
TIMP3-201ENST00000266085 NCOA5Q9HCD5 579 aaKnown RBP17.58■□□□□ 0.4
TIMP3-201ENST00000266085 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
TIMP3-201ENST00000266085 TRIM21P19474 475 aaKnown RBP17.57■□□□□ 0.4
TIMP3-201ENST00000266085 CASQ1P31415 396 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 TMCO3Q6UWJ1 677 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 BRINP3Q76B58 766 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 SYCP3Q8IZU3 236 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 PDCL2Q8N4E4 241 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 DNAJC25Q9H1X3 360 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 MAP3K4Q9Y6R4 1608 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 MAP3K15Q6ZN16 1313 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 GNA11P29992 359 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 HSP90AA4PQ58FG1 418 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 CCDC150Q8NCX0 1101 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 GOLGA6L9A6NEM1 432 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 PAFAH1B1P43034 410 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 ADCY10Q96PN6 1610 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 SPDYE3A6NKU9 549 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 LRRC24Q50LG9 513 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 DHX58Q96C10 678 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
TIMP3-201ENST00000266085 PSMA7O14818 248 aa17.56■□□□□ 0.4
TIMP3-201ENST00000266085 KRT2P35908 639 aa17.56■□□□□ 0.4
TIMP3-201ENST00000266085 FAM182BQ5T319 152 aa17.56■□□□□ 0.4
TIMP3-201ENST00000266085 GIGYF2Q6Y7W6 1299 aaKnown RBP17.56■□□□□ 0.4
TIMP3-201ENST00000266085 XRCC6P12956 609 aaKnown RBP eCLIP17.56■□□□□ 0.4
TIMP3-201ENST00000266085 GSPT1P15170 499 aaKnown RBP17.56■□□□□ 0.4
TIMP3-201ENST00000266085 CCDC66A2RUB6 948 aa17.56■□□□□ 0.4
TIMP3-201ENST00000266085 DTNBO60941 627 aa17.56■□□□□ 0.4
TIMP3-201ENST00000266085 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
TIMP3-201ENST00000266085 ATL3Q6DD88 541 aa17.56■□□□□ 0.4
TIMP3-201ENST00000266085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.56■□□□□ 0.4
TIMP3-201ENST00000266085 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
TIMP3-201ENST00000266085 IQGAP3Q86VI3 1631 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 FAM193AP78312 1265 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 TYRO3Q06418 890 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 CCDC102AQ96A19 550 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 QTRT2Q9H974 415 aaKnown RBP17.55■□□□□ 0.4
TIMP3-201ENST00000266085 ANKARQ7Z5J8 1434 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 CRACR2AQ9BSW2 395 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 TRPC5Q9UL62 973 aaPredicted RBP17.55■□□□□ 0.4
TIMP3-201ENST00000266085 GJA3Q9Y6H8 435 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 PARP1P09874 1014 aaKnown RBP17.55■□□□□ 0.4
TIMP3-201ENST00000266085 ASIC1P78348 528 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
TIMP3-201ENST00000266085 USPL1Q5W0Q7 1092 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 AOPEPQ8N6M6 819 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 COPRSQ9NQ92 184 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 MCM7P33993 719 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 HSPA4P34932 840 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
TIMP3-201ENST00000266085 EIF6P56537 245 aaKnown RBP17.54■□□□□ 0.4
TIMP3-201ENST00000266085 TSPYL1Q9H0U9 437 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 RBM28Q9NW13 759 aaKnown RBP17.54■□□□□ 0.4
TIMP3-201ENST00000266085 KRT79Q5XKE5 535 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 GYG1P46976 350 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 DNA2P51530 1060 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 SEPT7Q16181 437 aaKnown RBP17.54■□□□□ 0.4
TIMP3-201ENST00000266085 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 GREM2Q9H772 168 aa17.54■□□□□ 0.4
TIMP3-201ENST00000266085 AKR1B10O60218 316 aa17.53■□□□□ 0.4
TIMP3-201ENST00000266085 SNW1Q13573 536 aaKnown RBP17.53■□□□□ 0.4
TIMP3-201ENST00000266085 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
TIMP3-201ENST00000266085 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
TIMP3-201ENST00000266085 NF2P35240 595 aa17.53■□□□□ 0.4
TIMP3-201ENST00000266085 USP8P40818 1118 aa17.53■□□□□ 0.4
TIMP3-201ENST00000266085 CTDSPL2Q05D32 466 aa17.53■□□□□ 0.4
TIMP3-201ENST00000266085 CCDC186Q7Z3E2 898 aa17.53■□□□□ 0.4
TIMP3-201ENST00000266085 DNAI2Q9GZS0 605 aa17.53■□□□□ 0.4
TIMP3-201ENST00000266085 V9GY48 417 aaPredicted RBP17.53■□□□□ 0.4
TIMP3-201ENST00000266085 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
TIMP3-201ENST00000266085 SPATA31A3Q5VYP0 1347 aa17.53■□□□□ 0.4
TIMP3-201ENST00000266085 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
TIMP3-201ENST00000266085 BAG6P46379 1132 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 KCNQ4P56696 695 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 LUZP1Q86V48 1076 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 GPCPD1Q9NPB8 672 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 MAPKAPK5Q8IW41 473 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 CDK12Q9NYV4 1490 aaPredicted RBP17.52■□□□□ 0.4
TIMP3-201ENST00000266085 MAST3O60307 1309 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 CLTCL1P53675 1640 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 A0A0D9SFI3 127 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 PLS1Q14651 629 aa17.52■□□□□ 0.4
TIMP3-201ENST00000266085 RILPL1Q5EBL4 403 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 347.5 ms