RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 L1RE1Q9UN81 338 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 USP31Q70CQ4 1352 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 MYO1FO00160 1098 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 MYL6BP14649 208 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 RESTQ13127 1097 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 TMEM139Q8IV31 216 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 RABGGTAQ92696 567 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 ZSWIM6Q9HCJ5 1215 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 PIK3C2AO00443 1686 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 PEAK1Q9H792 1746 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 HMMRO75330 724 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 PPFIA4O75335 1185 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 ADD1P35611 737 aaKnown RBP10.1□□□□□ -0.79
VAPB-201ENST00000265619 VSNL1P62760 191 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 SCRN1Q12765 414 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 SEMA3FQ13275 785 aa10.1□□□□□ -0.79
VAPB-201ENST00000265619 CCDC151A5D8V7 595 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 RHOXF2BP0C7M4 288 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 CCT5P48643 541 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 NCAPHQ15003 741 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 GRIPAP1Q4V328 841 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 CCDC150Q8NCX0 1101 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 RHOXF2Q9BQY4 288 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 PPP2R2CQ9Y2T4 447 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 TATP17735 454 aaPredicted RBP10.09□□□□□ -0.79
VAPB-201ENST00000265619 IMPACTQ9P2X3 320 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 MKRN1Q9UHC7 482 aaKnown RBP10.09□□□□□ -0.79
VAPB-201ENST00000265619 CCDC196A0A1B0GTZ2 297 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 HSP90AA4PQ58FG1 418 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 ENGASEQ8NFI3 743 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 PHAXQ9H814 394 aaKnown RBP10.09□□□□□ -0.79
VAPB-201ENST00000265619 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
VAPB-201ENST00000265619 PTCD1O75127 700 aaKnown RBP10.08□□□□□ -0.8
VAPB-201ENST00000265619 TPM1P09493 284 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 CASP8Q14790 479 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
VAPB-201ENST00000265619 GOLGA1Q92805 767 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 BRF1Q92994 677 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 MIEF2Q96C03 454 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 GDAP1L1Q96MZ0 367 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 NEDD4P46934 1319 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 FRMD3A2A2Y4 597 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 CHL1O00533 1208 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 RAB11FIP3O75154 756 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 SYF2O95926 243 aaKnown RBP10.08□□□□□ -0.8
VAPB-201ENST00000265619 MTF1Q14872 753 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 CALR3Q96L12 384 aaKnown RBP10.08□□□□□ -0.8
VAPB-201ENST00000265619 FAM169AQ9Y6X4 670 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 FMN2Q9NZ56 1722 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 ARHGEF10O15013 1369 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 TOB2Q14106 344 aaPredicted RBP10.08□□□□□ -0.8
VAPB-201ENST00000265619 BORCS6Q96GS4 357 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 MRPL44Q9H9J2 332 aaKnown RBP10.08□□□□□ -0.8
VAPB-201ENST00000265619 SH2B1Q9NRF2 756 aaPredicted RBP10.08□□□□□ -0.8
VAPB-201ENST00000265619 ANO10Q9NW15 660 aa10.08□□□□□ -0.8
VAPB-201ENST00000265619 RNF40O75150 1001 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 SKAP2O75563 359 aaPredicted RBP10.07□□□□□ -0.8
VAPB-201ENST00000265619 MAP2K1Q02750 393 aaPredicted RBP10.07□□□□□ -0.8
VAPB-201ENST00000265619 ZRSR1Q15695 479 aaKnown RBP10.07□□□□□ -0.8
VAPB-201ENST00000265619 HSP90AB3PQ58FF7 597 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 HDXQ7Z353 690 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 CEP57L1Q8IYX8 460 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 A0A1B0GVL5 298 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 NEBLO76041 1014 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 A1BGP04217 495 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 GNAI2P04899 355 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 KCNJ6P48051 423 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 USP28Q96RU2 1077 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 SAMM50Q9Y512 469 aa10.07□□□□□ -0.8
VAPB-201ENST00000265619 EME2A4GXA9 379 aaPredicted RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 PPP1R12AO14974 1030 aaPredicted RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 WDHD1O75717 1129 aaPredicted RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 CHMP4BP1P59074 171 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 FANCCQ00597 558 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 SIL1Q9H173 461 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 CHPF2Q9P2E5 772 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 SH3BP1Q9Y3L3 701 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 LMTK3Q96Q04 1460 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 PRPF6O94906 941 aaKnown RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 CAVIN2O95810 425 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 ABL1P00519 1130 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 GPTP24298 496 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 BRD3Q15059 726 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 ZSCAN31Q96LW9 406 aaPredicted RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 SEC62Q99442 399 aaKnown RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 TOPAZ1Q8N9V7 1692 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 MST1RQ04912 1400 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 CUTAO60888 179 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 NECTIN1Q15223 517 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 FSIP1Q8NA03 581 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 CCDC12Q8WUD4 166 aaPredicted RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 N4BP2L2Q92802 583 aaPredicted RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 ZKSCAN4Q969J2 545 aaPredicted RBP10.06□□□□□ -0.8
VAPB-201ENST00000265619 KAT14Q9H8E8 782 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 INTS13Q9NVM9 706 aa10.06□□□□□ -0.8
VAPB-201ENST00000265619 POLD4Q9HCU8 107 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 GNL3LQ9NVN8 582 aaKnown RBP10.05□□□□□ -0.8
VAPB-201ENST00000265619 BTG4Q9NY30 223 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 EIF5P55010 431 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms