RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 A0A0D9SFI3 127 aa15.12■□□□□ 0.01
NUP54-201ENST00000264883 H3BQV1 296 aa15.12■□□□□ 0.01
NUP54-201ENST00000264883 PIP4K2BP78356 416 aa15.12■□□□□ 0.01
NUP54-201ENST00000264883 BRD3Q15059 726 aa15.12■□□□□ 0.01
NUP54-201ENST00000264883 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
NUP54-201ENST00000264883 NAA16Q6N069 864 aaPredicted RBP15.12■□□□□ 0.01
NUP54-201ENST00000264883 GOLGA1Q92805 767 aa15.12■□□□□ 0.01
NUP54-201ENST00000264883 ERCC4Q92889 916 aaPredicted RBP15.12■□□□□ 0.01
NUP54-201ENST00000264883 EAF2Q96CJ1 260 aaPredicted RBP15.12■□□□□ 0.01
NUP54-201ENST00000264883 DDX11Q96FC9 970 aa15.12■□□□□ 0.01
NUP54-201ENST00000264883 LGR6Q9HBX8 967 aa15.12■□□□□ 0.01
NUP54-201ENST00000264883 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
NUP54-201ENST00000264883 FAM160A1Q05DH4 1040 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 MMS22LQ6ZRQ5 1243 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 FAM177A1Q8N128 213 aaPredicted RBP15.11■□□□□ 0.01
NUP54-201ENST00000264883 TCEANC2Q96MN5 208 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 CXorf56Q9H5V9 222 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.11■□□□□ 0.016e-8■■■□□ 16.7
NUP54-201ENST00000264883 PA2G4Q9UQ80 394 aaKnown RBP15.11■□□□□ 0.01
NUP54-201ENST00000264883 PKD1L3Q7Z443 1732 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 ZSCAN12O43309 604 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 CPP00450 1065 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 TXLNAP40222 546 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 BRF1Q92994 677 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 NEK1Q96PY6 1258 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 MRFAP1Q9Y605 127 aa15.11■□□□□ 0.01
NUP54-201ENST00000264883 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
NUP54-201ENST00000264883 MYH15Q9Y2K3 1946 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 TAF5LO75529 589 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 CSB-PGBD3P0DP91 1061 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 GSCP56915 257 aaPredicted RBP15.1■□□□□ 0.01
NUP54-201ENST00000264883 MCM6Q14566 821 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 EFCAB13Q8IY85 973 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 ENGASEQ8NFI3 743 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 RAPGEF4Q8WZA2 1011 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 UTP14AQ9BVJ6 771 aaKnown RBP15.1■□□□□ 0.01
NUP54-201ENST00000264883 SIPA1L3O60292 1781 aaPredicted RBP15.1■□□□□ 0.01
NUP54-201ENST00000264883 ANKRD65E5RJM6 399 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 COL9A3Q14050 684 aaPredicted RBP15.1■□□□□ 0.01
NUP54-201ENST00000264883 ZRSR1Q15695 479 aaKnown RBP15.1■□□□□ 0.01
NUP54-201ENST00000264883 HDXQ7Z353 690 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 SMARCC2Q8TAQ2 1214 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 BPIFA3Q9BQP9 254 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 RCOR1Q9UKL0 485 aa15.1■□□□□ 0.01
NUP54-201ENST00000264883 VWA3AA6NCI4 1184 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 JAK2O60674 1132 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 EIF3JO75822 258 aaKnown RBP15.09■□□□□ 0.01
NUP54-201ENST00000264883 EP400NLQ6ZTU2 488 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 SUCLG2Q96I99 432 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 ZNF396Q96N95 335 aaPredicted RBP15.09■□□□□ 0.01
NUP54-201ENST00000264883 CEP89Q96ST8 783 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 FAN1Q9Y2M0 1017 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 RNMTO43148 476 aaKnown RBP15.09■□□□□ 0.01
NUP54-201ENST00000264883 ATP5JP18859 108 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 GNG11P61952 73 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 C1orf141Q5JVX7 400 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 LRRC31Q6UY01 552 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 FCHSD1Q86WN1 690 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 FSIP1Q8NA03 581 aa15.09■□□□□ 0.01
NUP54-201ENST00000264883 BICC1Q9H694 974 aaKnown RBP15.09■□□□□ 0.01
NUP54-201ENST00000264883 TATP17735 454 aaPredicted RBP15.08■□□□□ 0
NUP54-201ENST00000264883 DPCR1Q3MIW9 517 aa15.08■□□□□ 0
NUP54-201ENST00000264883 MPRIPQ6WCQ1 1025 aa15.08■□□□□ 0
NUP54-201ENST00000264883 FMNL2Q96PY5 1086 aa15.08■□□□□ 0
NUP54-201ENST00000264883 CCDC8Q9H0W5 538 aaPredicted RBP15.08■□□□□ 0
NUP54-201ENST00000264883 BOLA2Q9H3K6 86 aa15.08■□□□□ 0
NUP54-201ENST00000264883 DDX21Q9NR30 783 aaKnown RBP eCLIP15.08■□□□□ 0
NUP54-201ENST00000264883 DONSONQ9NYP3 566 aa15.08■□□□□ 0
NUP54-201ENST00000264883 ADD1P35611 737 aaKnown RBP15.07■□□□□ 0
NUP54-201ENST00000264883 HNRNPLLQ8WVV9 542 aaKnown RBP15.07■□□□□ 0
NUP54-201ENST00000264883 WDR24Q96S15 920 aa15.07■□□□□ 0
NUP54-201ENST00000264883 SDF4Q9BRK5 362 aa15.07■□□□□ 0
NUP54-201ENST00000264883 AKAP2Q9Y2D5 859 aa15.07■□□□□ 0
NUP54-201ENST00000264883 SCN11AQ9UI33 1791 aa15.07■□□□□ 0
NUP54-201ENST00000264883 COL15A1P39059 1388 aa15.07■□□□□ 0
NUP54-201ENST00000264883 KCNQ3O43525 872 aa15.07■□□□□ 0
NUP54-201ENST00000264883 PFKFB2O60825 505 aa15.07■□□□□ 0
NUP54-201ENST00000264883 N4BP1O75113 896 aaKnown RBP15.07■□□□□ 0
NUP54-201ENST00000264883 TADA2BQ86TJ2 420 aa15.07■□□□□ 0
NUP54-201ENST00000264883 FTOQ9C0B1 505 aaKnown RBP eCLIP15.07■□□□□ 0
NUP54-201ENST00000264883 PPP2R2CQ9Y2T4 447 aa15.07■□□□□ 0
NUP54-201ENST00000264883 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
NUP54-201ENST00000264883 FANCCQ00597 558 aa15.06■□□□□ 0
NUP54-201ENST00000264883 CWF19L2Q2TBE0 894 aaKnown RBP15.06■□□□□ 0
NUP54-201ENST00000264883 BEND6Q5SZJ8 279 aaPredicted RBP15.06■□□□□ 0
NUP54-201ENST00000264883 MSL3Q8N5Y2 521 aaKnown RBP15.06■□□□□ 0
NUP54-201ENST00000264883 KAZALD1Q96I82 304 aa15.06■□□□□ 0
NUP54-201ENST00000264883 PARP4Q9UKK3 1724 aaKnown RBP15.06■□□□□ 0
NUP54-201ENST00000264883 A0A087WUV0 522 aaPredicted RBP15.06■□□□□ 0
NUP54-201ENST00000264883 GOLGA6L9A6NEM1 432 aa15.06■□□□□ 0
NUP54-201ENST00000264883 KDM6AO15550 1401 aaPredicted RBP15.06■□□□□ 0
NUP54-201ENST00000264883 ANXA1P04083 346 aa15.06■□□□□ 0
NUP54-201ENST00000264883 MAP2K2P36507 400 aa15.06■□□□□ 0
NUP54-201ENST00000264883 NEXNQ0ZGT2 675 aa15.06■□□□□ 0
NUP54-201ENST00000264883 ZNF589Q86UQ0 364 aaPredicted RBP15.06■□□□□ 0
NUP54-201ENST00000264883 ANKRD20A12PQ8NF67 263 aa15.06■□□□□ 0
NUP54-201ENST00000264883 COPRSQ9NQ92 184 aa15.06■□□□□ 0
NUP54-201ENST00000264883 ME1P48163 572 aa15.05■□□□□ 0
NUP54-201ENST00000264883 Q6ZUG5 572 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms