RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 SECISBP2LQ93073 1101 aaKnown RBP20.23■□□□□ 0.83
ITGA6-201ENST00000264107 TSC22D3Q99576 134 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 BRD1O95696 1058 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 TRIM14Q14142 442 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 WHAMMQ8TF30 809 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 SPINK5Q9NQ38 1064 aaPredicted RBP20.23■□□□□ 0.83
ITGA6-201ENST00000264107 ANKRD65E5RJM6 399 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 PNMA6AP0CW24 399 aaPredicted RBP20.22■□□□□ 0.83
ITGA6-201ENST00000264107 STAT6P42226 847 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 USP5P45974 858 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 CCDC62Q6P9F0 684 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 GSDMBQ8TAX9 411 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 STRN4Q9NRL3 753 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 PSMC4P43686 418 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 TMTC1Q8IUR5 882 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 RNF40O75150 1001 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 RNASE9P60153 205 aaKnown RBP20.22■□□□□ 0.83
ITGA6-201ENST00000264107 HAND2P61296 217 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 IQCA1Q86XH1 822 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 KRT71Q3SY84 523 aa20.22■□□□□ 0.83
ITGA6-201ENST00000264107 FAM173BQ6P4H8 233 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 A0A087WZG4 1122 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 MAP7D1Q3KQU3 841 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 TMEM67Q5HYA8 995 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 TSNARE1Q96NA8 513 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 NUTM2GQ5VZR2 741 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 CROCCP2Q86T23 111 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 NCOA7Q8NI08 942 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 BMP15O95972 392 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 NLRP6P59044 892 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 MTMR3Q13615 1198 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 SESN3P58005 492 aa20.21■□□□□ 0.83
ITGA6-201ENST00000264107 ZNF76P36508 570 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 TAF7Q15545 349 aaPredicted RBP20.2■□□□□ 0.82
ITGA6-201ENST00000264107 RUFY3Q7L099 469 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 CXorf56Q9H5V9 222 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 CHUKO15111 745 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 RHPN1Q8TCX5 695 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 LEO1Q8WVC0 666 aaPredicted RBP20.2■□□□□ 0.82
ITGA6-201ENST00000264107 SH3GL3Q99963 347 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 PPP2R2CQ9Y2T4 447 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 UTP11Q9Y3A2 253 aaKnown RBP20.2■□□□□ 0.82
ITGA6-201ENST00000264107 IL16Q14005 1332 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 MINDY4BA8MYZ0 360 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 PPFIA2O75334 1257 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 GSTA5Q7RTV2 222 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 TBC1D5Q92609 795 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 CABP1Q9NZU7 370 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 RANBP1P43487 201 aa20.2■□□□□ 0.82
ITGA6-201ENST00000264107 IBTKQ9P2D0 1353 aaPredicted RBP20.19■□□□□ 0.82
ITGA6-201ENST00000264107 PSDA5PKW4 1024 aaPredicted RBP20.19■□□□□ 0.82
ITGA6-201ENST00000264107 TCP11Q8WWU5 503 aa20.19■□□□□ 0.82
ITGA6-201ENST00000264107 NLRP12P59046 1061 aa20.19■□□□□ 0.82
ITGA6-201ENST00000264107 PPP1R42Q7Z4L9 355 aa20.19■□□□□ 0.82
ITGA6-201ENST00000264107 ZBTB40Q9NUA8 1239 aa20.19■□□□□ 0.82
ITGA6-201ENST00000264107 SAR1BQ9Y6B6 198 aa20.19■□□□□ 0.82
ITGA6-201ENST00000264107 SEC63Q9UGP8 760 aaKnown RBP20.19■□□□□ 0.82
ITGA6-201ENST00000264107 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
ITGA6-201ENST00000264107 MEIS3Q99687 375 aa20.19■□□□□ 0.82
ITGA6-201ENST00000264107 DCTPP1Q9H773 170 aa20.19■□□□□ 0.82
ITGA6-201ENST00000264107 PTPDC1A2A3K4 754 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 GUCY2CP25092 1073 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 ARMC2Q8NEN0 867 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 ACTN4O43707 911 aaKnown RBP20.18■□□□□ 0.82
ITGA6-201ENST00000264107 WWC2Q6AWC2 1192 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 KIF6Q6ZMV9 814 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 PPP1R13BQ96KQ4 1090 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 LRP2BPQ9P2M1 347 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 CREB3O43889 395 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 CHMLP26374 656 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 EVA1CP58658 441 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 BRAPQ7Z569 592 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 RGS22Q8NE09 1264 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 PLCB1Q9NQ66 1216 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 NRBP1Q9UHY1 535 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 VPS16Q9H269 839 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.18■□□□□ 0.82
ITGA6-201ENST00000264107 TMCO4Q5TGY1 634 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 SLF1Q9BQI6 1058 aa20.18■□□□□ 0.82
ITGA6-201ENST00000264107 TMEM110-MUSTN1A8MSY1 372 aa20.17■□□□□ 0.82
ITGA6-201ENST00000264107 PSMB7Q99436 277 aa20.17■□□□□ 0.82
ITGA6-201ENST00000264107 ATP2A2P16615 1042 aaKnown RBP20.17■□□□□ 0.82
ITGA6-201ENST00000264107 KLHL7Q8IXQ5 586 aa20.17■□□□□ 0.82
ITGA6-201ENST00000264107 GUCY2FP51841 1108 aa20.17■□□□□ 0.82
ITGA6-201ENST00000264107 RRS1Q15050 365 aaKnown RBP20.17■□□□□ 0.82
ITGA6-201ENST00000264107 KLHL14Q9P2G3 628 aa20.17■□□□□ 0.82
ITGA6-201ENST00000264107 ZRANB1Q9UGI0 708 aa20.17■□□□□ 0.82
ITGA6-201ENST00000264107 TMED1Q13445 227 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 TAF11Q15544 211 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 TRIM31Q9BZY9 425 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 ANTXR1Q9H6X2 564 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 YIPF3Q9GZM5 350 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 DAPK1P53355 1430 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 CPA1P15085 419 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 CTNNA1P35221 906 aaKnown RBP20.16■□□□□ 0.82
ITGA6-201ENST00000264107 CATIPQ7Z7H3 387 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 CCDC65Q8IXS2 484 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 FAM212AQ96EL1 285 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 CCDC141Q6ZP82 1450 aa20.16■□□□□ 0.82
ITGA6-201ENST00000264107 GYS2P54840 703 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms