RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MYH7P12883 1935 aa26.32■■□□□ 1.8
MCF2L-201ENST00000261963 TNNT1P13805 278 aa26.32■■□□□ 1.8
MCF2L-201ENST00000261963 SLC9C2Q5TAH2 1124 aa26.32■■□□□ 1.8
MCF2L-201ENST00000261963 NCOA7Q8NI08 942 aa26.32■■□□□ 1.8
MCF2L-201ENST00000261963 MYH3P11055 1940 aa26.32■■□□□ 1.8
MCF2L-201ENST00000261963 SLIT2O94813 1529 aa26.32■■□□□ 1.8
MCF2L-201ENST00000261963 ATRNO75882 1429 aa26.32■■□□□ 1.8
MCF2L-201ENST00000261963 KLF18A0A0U1RQI7 1052 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 ZNF213O14771 459 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 PHKA1P46020 1223 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 ATL3Q6DD88 541 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 CCDC186Q7Z3E2 898 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 CCDC112Q8NEF3 446 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 GOLPH3LQ9H4A5 285 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 NUP98P52948 1817 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 CCDC102BQ68D86 513 aa26.31■■□□□ 1.8
MCF2L-201ENST00000261963 ZSCAN25Q6NSZ9 544 aa26.3■■□□□ 1.8
MCF2L-201ENST00000261963 ZNF396Q96N95 335 aaPredicted RBP26.3■■□□□ 1.8
MCF2L-201ENST00000261963 ARID4AP29374 1257 aaPredicted RBP26.3■■□□□ 1.8
MCF2L-201ENST00000261963 CCAR1Q8IX12 1150 aaKnown RBP26.3■■□□□ 1.8
MCF2L-201ENST00000261963 PLCH1Q4KWH8 1693 aa26.3■■□□□ 1.8
MCF2L-201ENST00000261963 GOLGA8BA8MQT2 603 aa26.29■■□□□ 1.8
MCF2L-201ENST00000261963 TTF1Q15361 905 aaPredicted RBP26.29■■□□□ 1.8
MCF2L-201ENST00000261963 DRC7Q8IY82 874 aa26.29■■□□□ 1.8
MCF2L-201ENST00000261963 NKX2-3Q8TAU0 364 aa26.29■■□□□ 1.8
MCF2L-201ENST00000261963 DENND2AQ9ULE3 1009 aa26.29■■□□□ 1.8
MCF2L-201ENST00000261963 LRP5O75197 1615 aa26.29■■□□□ 1.8
MCF2L-201ENST00000261963 UBE3CQ15386 1083 aa26.29■■□□□ 1.8
MCF2L-201ENST00000261963 RALYLQ86SE5 291 aaKnown RBP26.29■■□□□ 1.8
MCF2L-201ENST00000261963 KIF18AQ8NI77 898 aa26.29■■□□□ 1.8
MCF2L-201ENST00000261963 WDR19Q8NEZ3 1342 aa26.29■■□□□ 1.8
MCF2L-201ENST00000261963 FGFR2P21802 821 aa26.28■■□□□ 1.8
MCF2L-201ENST00000261963 OTUD7BQ6GQQ9 843 aa26.28■■□□□ 1.8
MCF2L-201ENST00000261963 RAB11FIP4Q86YS3 637 aa26.28■■□□□ 1.8
MCF2L-201ENST00000261963 DDX60Q8IY21 1712 aaKnown RBP26.28■■□□□ 1.8
MCF2L-201ENST00000261963 IDH1O75874 414 aaKnown RBP26.28■■□□□ 1.8
MCF2L-201ENST00000261963 COL16A1Q07092 1604 aaPredicted RBP26.28■■□□□ 1.8
MCF2L-201ENST00000261963 LRMPQ12912 555 aa26.28■■□□□ 1.8
MCF2L-201ENST00000261963 SNW1Q13573 536 aaKnown RBP26.28■■□□□ 1.8
MCF2L-201ENST00000261963 TBC1D10CQ8IV04 446 aa26.28■■□□□ 1.8
MCF2L-201ENST00000261963 DNAJC25Q9H1X3 360 aa26.28■■□□□ 1.8
MCF2L-201ENST00000261963 HELBQ8NG08 1087 aaPredicted RBP26.27■■□□□ 1.8
MCF2L-201ENST00000261963 TDRD7Q8NHU6 1098 aaKnown RBP26.27■■□□□ 1.8
MCF2L-201ENST00000261963 ZNF532Q9HCE3 1301 aa26.27■■□□□ 1.8
MCF2L-201ENST00000261963 TCRBV5S4A2TA0A5A2 114 aa26.27■■□□□ 1.8
MCF2L-201ENST00000261963 CCDC66A2RUB6 948 aa26.27■■□□□ 1.8
MCF2L-201ENST00000261963 ENGASEQ8NFI3 743 aa26.27■■□□□ 1.8
MCF2L-201ENST00000261963 WWC3Q9ULE0 1092 aa26.27■■□□□ 1.8
MCF2L-201ENST00000261963 PDE6AP16499 860 aa26.26■■□□□ 1.79
MCF2L-201ENST00000261963 EIF5P55010 431 aaKnown RBP26.26■■□□□ 1.79
MCF2L-201ENST00000261963 NAA30Q147X3 362 aaPredicted RBP26.26■■□□□ 1.79
MCF2L-201ENST00000261963 PUM3Q15397 648 aaKnown RBP26.26■■□□□ 1.79
MCF2L-201ENST00000261963 TERF2Q15554 542 aa26.26■■□□□ 1.79
MCF2L-201ENST00000261963 LPIN2Q92539 896 aa26.26■■□□□ 1.79
MCF2L-201ENST00000261963 DHX16O60231 1041 aaKnown RBP26.25■■□□□ 1.79
MCF2L-201ENST00000261963 ZNF165P49910 485 aa26.25■■□□□ 1.79
MCF2L-201ENST00000261963 KRT222Q8N1A0 295 aa26.25■■□□□ 1.79
MCF2L-201ENST00000261963 ORC3Q9UBD5 711 aaPredicted RBP26.25■■□□□ 1.79
MCF2L-201ENST00000261963 UQCRFS1P1P0C7P4 283 aa26.25■■□□□ 1.79
MCF2L-201ENST00000261963 PDE4CQ08493 712 aa26.25■■□□□ 1.79
MCF2L-201ENST00000261963 SUSD4Q5VX71 490 aa26.25■■□□□ 1.79
MCF2L-201ENST00000261963 INTS5Q6P9B9 1019 aaKnown RBP26.25■■□□□ 1.79
MCF2L-201ENST00000261963 C8orf76Q96K31 380 aa26.25■■□□□ 1.79
MCF2L-201ENST00000261963 MYO5AQ9Y4I1 1855 aaKnown RBP26.25■■□□□ 1.79
MCF2L-201ENST00000261963 MROH5Q6ZUA9 1318 aa26.24■■□□□ 1.79
MCF2L-201ENST00000261963 TPD52L1Q16890 204 aaPredicted RBP26.24■■□□□ 1.79
MCF2L-201ENST00000261963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.24■■□□□ 1.79
MCF2L-201ENST00000261963 FBXO18Q8NFZ0 1043 aa26.24■■□□□ 1.79
MCF2L-201ENST00000261963 RTEL1Q9NZ71 1219 aa26.24■■□□□ 1.79
MCF2L-201ENST00000261963 CYB5R4Q7L1T6 521 aa26.24■■□□□ 1.79
MCF2L-201ENST00000261963 NRBP1Q9UHY1 535 aa26.24■■□□□ 1.79
MCF2L-201ENST00000261963 ME1P48163 572 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 FAM160A1Q05DH4 1040 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 CCDC73Q6ZRK6 1079 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 AK7Q96M32 723 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 GJB4Q9NTQ9 266 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 SNAP23O00161 211 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 CTAGE5O15320 804 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 TRIM5Q9C035 493 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 PCDHA7Q9UN72 937 aa26.23■■□□□ 1.79
MCF2L-201ENST00000261963 DOT1LQ8TEK3 1739 aa26.22■■□□□ 1.79
MCF2L-201ENST00000261963 ZNF75DP51815 510 aa26.22■■□□□ 1.79
MCF2L-201ENST00000261963 FSIP1Q8NA03 581 aa26.22■■□□□ 1.79
MCF2L-201ENST00000261963 ZNF397Q8NF99 534 aaPredicted RBP26.22■■□□□ 1.79
MCF2L-201ENST00000261963 STRBPQ96SI9 672 aaKnown RBP26.22■■□□□ 1.79
MCF2L-201ENST00000261963 TRDNQ13061 729 aa26.22■■□□□ 1.79
MCF2L-201ENST00000261963 PLA2G4DQ86XP0 818 aa26.22■■□□□ 1.79
MCF2L-201ENST00000261963 ANGEL1Q9UNK9 670 aaKnown RBP26.22■■□□□ 1.79
MCF2L-201ENST00000261963 CPLX1O14810 134 aa26.21■■□□□ 1.79
MCF2L-201ENST00000261963 APPP05067 770 aa26.21■■□□□ 1.79
MCF2L-201ENST00000261963 LINC00301Q8NCQ3 95 aa26.21■■□□□ 1.79
MCF2L-201ENST00000261963 WNK3Q9BYP7 1800 aa26.21■■□□□ 1.79
MCF2L-201ENST00000261963 SH2B2O14492 632 aaPredicted RBP26.2■■□□□ 1.79
MCF2L-201ENST00000261963 CAVIN2O95810 425 aa26.2■■□□□ 1.79
MCF2L-201ENST00000261963 CDK11BP21127 795 aaKnown RBP26.2■■□□□ 1.79
MCF2L-201ENST00000261963 IQCB1Q15051 598 aa26.2■■□□□ 1.79
MCF2L-201ENST00000261963 CEP135Q66GS9 1140 aa26.2■■□□□ 1.79
MCF2L-201ENST00000261963 C11orf57Q6ZUT1 292 aaPredicted RBP26.2■■□□□ 1.79
MCF2L-201ENST00000261963 SPATA5Q8NB90 893 aa26.2■■□□□ 1.79
MCF2L-201ENST00000261963 SEC31BQ9NQW1 1179 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms