RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TPCN1Q9ULQ1 816 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 IGKV6D-41A0A0C4DH26 115 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 APOBEC3HQ6NTF7 200 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 C15orf52Q6ZUT6 534 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 OLIG1Q8TAK6 271 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 SIL1Q9H173 461 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 RGL2O15211 777 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 FANCGO15287 622 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 ATP5JP18859 108 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 NFIAQ12857 509 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 ESYT1Q9BSJ8 1104 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 ITPR1Q14643 2758 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 MAPK8IP3Q9UPT6 1336 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 WDHD1O75717 1129 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 CIAO1O76071 339 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 TNFRSF25Q93038 417 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 ROBO3Q96MS0 1386 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 IL1R1P14778 569 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 PLCD1P51178 756 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 NSUN4Q96CB9 384 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 CHRNDQ07001 517 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 CCDC102BQ68D86 513 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 RPAP2Q8IXW5 612 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 FBXL16Q8N461 479 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 IGDCC4Q8TDY8 1250 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 CRYGNQ8WXF5 182 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 TCEANC2Q96MN5 208 aa7.13□□□□□ -1.27
TOPBP1-201ENST00000260810 CLEC10AQ8IUN9 316 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 SH3TC1Q8TE82 1336 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 NMT2O60551 498 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 WNK4Q96J92 1243 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 MTRQ99707 1265 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 RAD50Q92878 1312 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 PEX10O60683 326 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 SLC4A10Q6U841 1118 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 TDRD7Q8NHU6 1098 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 SRCIN1Q9C0H9 1055 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 MAP3K10Q02779 954 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 IL17AQ16552 155 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 MSL1Q68DK7 614 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 SCARA3Q6AZY7 606 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 ERICH6Q7L0X2 663 aa7.12□□□□□ -1.27
TOPBP1-201ENST00000260810 PHF20L1A8MW92 1017 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 ZMYM1Q5SVZ6 1142 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 FAM198AQ9UFP1 575 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 PKN1Q16512 942 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 XAGE2Q96GT9 111 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 EYA2O00167 538 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 CYP2D6P10635 497 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 AIFM3Q96NN9 605 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 FTOQ9C0B1 505 aaKnown RBP eCLIP7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 GAKO14976 1311 aa7.11□□□□□ -1.27
TOPBP1-201ENST00000260810 CDC27P30260 824 aa7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 LCORLQ8N3X6 602 aa7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 STRBPQ96SI9 672 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 BDP1A6H8Y1 2624 aa7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 CCT4P50991 539 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 MB21D2Q8IYB1 491 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 FUCA2Q9BTY2 467 aa7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 A0A1W2PRG0 241 aa7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 IRS4O14654 1257 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 GNPATO15228 680 aa7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 GRIN1Q05586 938 aa7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 NMIQ13287 307 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 ME3Q16798 604 aa7.1□□□□□ -1.27
TOPBP1-201ENST00000260810 NEFMP07197 916 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 HSPD1P10809 573 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 PTGS1P23219 599 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 TBC1D16Q8TBP0 767 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 CCNL1Q9UK58 526 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 DDX49Q9Y6V7 483 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 PRRC2CQ9Y520 2896 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 DYNLL1P63167 89 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 DACT2Q5SW24 774 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 TET1Q8NFU7 2136 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 GNAI2P04899 355 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 BMP6P22004 513 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 JAG2Q9Y219 1238 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 MX1P20591 662 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 SCNN1DP51172 638 aa7.09□□□□□ -1.27
TOPBP1-201ENST00000260810 SSFA2P28290 1259 aa7.09□□□□□ -1.28
TOPBP1-201ENST00000260810 DDX46Q7L014 1031 aaKnown RBP7.09□□□□□ -1.28
TOPBP1-201ENST00000260810 GLIS2Q9BZE0 524 aaPredicted RBP7.09□□□□□ -1.28
TOPBP1-201ENST00000260810 BSDC1Q9NW68 430 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 MRVI1Q9Y6F6 885 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 LTBP3Q9NS15 1303 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 CASP8AP2Q9UKL3 1982 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 KIF28PB7ZC32 967 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 MS4A1P11836 297 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 RGS3P49796 1198 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 TEFQ10587 303 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 ADD2P35612 726 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 TOB1P50616 345 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 DIXDC1Q155Q3 683 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 ANKRD45Q5TZF3 282 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 GPT2Q8TD30 523 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 ZNF541Q9H0D2 1346 aa7.08□□□□□ -1.28
TOPBP1-201ENST00000260810 SLC44A5Q8NCS7 719 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms